DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB65

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001327042.1 Gene:MYB65 / 820317 AraportID:AT3G11440 Length:553 Species:Arabidopsis thaliana


Alignment Length:438 Identity:106/438 - (24%)
Similarity:183/438 - (41%) Gaps:123/438 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKEDE 197
            |.|||||..||.::|..|:..|...|..:.::.: .|.||.||.||.|||.||:||.|::::|::
plant    41 LKKGPWTSTEDGILIDYVKKHGEGNWNAVQKHTSLARCGKSCRLRWANHLRPNLKKGAFSQEEEQ 105

  Fly   198 IIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRK-------------------------- 236
            :|.:.|.::||:||::|:.|||||||.|||:||:.::|:                          
plant   106 LIVEMHAKMGNKWAQMAEHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEIYVDDLHWSEEYTKS 170

  Fly   237 --YDVERR--------------------------------------SVNASGSDLKSSR--THLI 259
              ..|:||                                      :.|..|:...|||  :::.
plant   171 NIIRVDRRRRHQDFLQLGNSKDNVLFDDLNFAASLLPAASDLSDLVACNMLGTGASSSRYESYMP 235

  Fly   260 TLI-------KSGG-ISKCMNNMQHNKES----GGEAVNKSENADGASVTAVKGGDLAQESQDDH 312
            .::       :||. ...|.:|::|..:|    ...||.|:..:...|...|           ||
plant   236 PILPSPKQIWESGSRFPMCSSNIKHEFQSPEHFQNTAVQKNPRSCSISPCDV-----------DH 289

  Fly   313 Q--KGSNLAHLSM---QHLIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARS 372
            .  :..:.:|:.|   .|.:...|...:..:....:..:|...:    |.:..|:|.:...:   
plant   290 HPYENQHSSHMMMVPDSHTVTYGMHPTSKPLFGAVKLELPSFQY----SETSAFDQWKTTPS--- 347

  Fly   373 RPPSSPVISP----IKSLPFSPSHFLKSPCLTTFE----DMDLRASTPVTKVYNRVGMEIKKEME 429
             ||.|.::..    |:|.|  ||...:|.|.::.:    ||.|..:...|...:.:.|...::..
plant   348 -PPHSDLLDSVDAYIQSPP--PSQVEESDCFSSCDTGLLDMLLHEAKIKTSAKHSLLMSSPQKSF 409

  Fly   430 TSSIETPHKSQLGPRTPTPFKKALAAIGKKRDGRRY----EPSSPSSL 473
            :|:..|.:.:|..||.    .:.|...|:..|.::|    |.:|||.|
plant   410 SSTTCTTNVTQNVPRG----SENLIKSGEYEDSQKYLGRSEITSPSQL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 8/12 (67%)
SANT 136..184 CDD:197842 21/48 (44%)
Myb_DNA-bind_6 139..197 CDD:290632 24/58 (41%)
SANT 188..235 CDD:197842 22/46 (48%)
Myb_DNA-binding 188..233 CDD:278669 22/44 (50%)
Cmyb_C 388..530 CDD:286408 23/94 (24%)
MYB65NP_001327042.1 SANT 41..>146 CDD:333364 48/104 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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