DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB108

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_187301.1 Gene:MYB108 / 819827 AraportID:AT3G06490 Length:323 Species:Arabidopsis thaliana


Alignment Length:209 Identity:63/209 - (30%)
Similarity:97/209 - (46%) Gaps:35/209 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 ELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLN-GRIGKQCRERWHNHLNPNIKKTAWTEKED 196
            :|.:||||.:||..::..:...|..:|..::|... .|.||.||.||.|:|.|::::...|.:|.
plant    18 DLKRGPWTAEEDFKLMNYIATNGEGRWNSLSRCAGLQRTGKSCRLRWLNYLRPDVRRGNITLEEQ 82

  Fly   197 EIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRR-----KYDVE---------------- 240
            .:|.:.|...||:|:|||:.|||||||.|||:|.:.:::     |.||.                
plant    83 LLILELHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKHAKQLKCDVNSQQFKDTMKYLWMPRL 147

  Fly   241 -RRSVNASGSDLKSSRTHLITLIKSGGISKCMN-------NMQHNKESGGEAVNKSENAD----- 292
             .|..:||.|...::.|...|...|.|.|.|:.       |..:|..:.|:......|.|     
plant   148 VERIQSASASSAAAATTTTTTTTGSAGTSSCITTSNNQFMNYDYNNNNMGQQFGVMSNNDYITPE 212

  Fly   293 GASVTAVKGGDLAQ 306
            .:||......||.:
plant   213 NSSVAVSPASDLTE 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 7/13 (54%)
SANT 136..184 CDD:197842 18/48 (38%)
Myb_DNA-bind_6 139..197 CDD:290632 19/58 (33%)
SANT 188..235 CDD:197842 21/46 (46%)
Myb_DNA-binding 188..233 CDD:278669 21/44 (48%)
Cmyb_C 388..530 CDD:286408
MYB108NP_187301.1 PLN03212 16..>136 CDD:178751 44/117 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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