DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB101

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_180805.1 Gene:MYB101 / 817807 AraportID:AT2G32460 Length:490 Species:Arabidopsis thaliana


Alignment Length:492 Identity:122/492 - (24%)
Similarity:191/492 - (38%) Gaps:153/492 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG--RIGKQCRERWHNHLNPNIKKTAWTEKED 196
            |.|||||..||.::.:.||..|...|..:.:. :|  |.||.||.||.|||.||:||.::|..|:
plant    18 LKKGPWTTTEDAILTEYVRKHGEGNWNAVQKN-SGLLRCGKSCRLRWANHLRPNLKKGSFTPDEE 81

  Fly   197 EIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITL 261
            :||...|.:|||:||::|.:|||||||.|||:||:.|:|:                         
plant    82 KIIIDLHAKLGNKWARMASQLPGRTDNEIKNYWNTRMKRR------------------------- 121

  Fly   262 IKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVKGGDLAQESQDD----HQKGSNLAHLS 322
             :..|:....:.:||                       :|.|:..|.:.|    ..:..:|.| :
plant   122 -QRAGLPLYPHEIQH-----------------------QGIDIDDEFEFDLTSFQFQNQDLDH-N 161

  Fly   323 MQHLIKLTMPRQTPIILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIKSLP 387
            .|::|:.|....|                   .|||.:|:...:..:.|.||  .|::|      
plant   162 HQNMIQYTNSSNT-------------------SSSSSSFSSSSSQPSKRLRP--DPLVS------ 199

  Fly   388 FSPSHFLKSPCLTTFED--MDLRASTPVTKVYNRVGMEIKKEMETSSIETPHKSQLGPRTPTPFK 450
                   .:|.|....|  ||.:    :..:||            :|:|..: :|.|      |.
plant   200 -------TNPGLNPIPDSSMDFQ----MFSLYN------------NSLENDN-NQFG------FS 234

  Fly   451 KALAAIGKKRDGRRYEPSSPSSLVEDLAEIIHEEHLSNSLTAN-NSKMMGAADQNSTLSTEYNAQ 514
            ..|::.....     |..:|:.::|.::|        ||.|.| |.|.:.|...:|.|..:...:
plant   235 VPLSSSSSSN-----EVCNPNHILEYISE--------NSDTRNTNKKDIDAMSYSSLLMGDLEIR 286

  Fly   515 SPPHMKRARKSLLSTWSSNHPYNAGSAKRI--QPFETETPS------------KFLTSPGDILKD 565
            |.........|:|...|:..|.::.|:..|  .....|.||            ....|.|.:.||
plant   287 SSSFPLGLDNSVLELPSNQRPTHSFSSSPIIDNGVHLEPPSGNSGLLDALLEESQALSRGGLFKD 351

  Fly   566 TLCSEQDLPFDEGRKENRPFHNRRINKYRGGLTYDHV 602
            ...|..||...:.::....|.|         |..||:
plant   352 VRVSSSDLCEVQDKRVKMDFEN---------LLIDHL 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842
Myb_DNA-bind_6 88..147 CDD:290632 8/12 (67%)
SANT 136..184 CDD:197842 22/49 (45%)
Myb_DNA-bind_6 139..197 CDD:290632 25/59 (42%)
SANT 188..235 CDD:197842 25/46 (54%)
Myb_DNA-binding 188..233 CDD:278669 24/44 (55%)
Cmyb_C 388..530 CDD:286408 29/144 (20%)
MYB101NP_180805.1 SANT 17..>121 CDD:333364 51/103 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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