DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and MYB100

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_180095.1 Gene:MYB100 / 817061 AraportID:AT2G25230 Length:234 Species:Arabidopsis thaliana


Alignment Length:185 Identity:75/185 - (40%)
Similarity:109/185 - (58%) Gaps:21/185 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 LEQQVQQRWAKVLN-------PELIKGPWTRDEDDMVIKLVRNFGPK-KWTLIARYLNGRIGKQC 174
            :::..|::..||::       .::.|..||..| |:.:|.:...||| |||.:|:...||.||||
plant     1 MKKNYQKKNIKVVSTSKYLKKSDIDKVNWTESE-DIKLKEIMALGPKNKWTKVAKKFEGRTGKQC 64

  Fly   175 RERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDV 239
            ||||:||..||||||||:|:||:|:.:||..||.:|.:||::||||:||.||||||:|.||..:.
plant    65 RERWYNHARPNIKKTAWSEEEDQILIEAHKVLGTKWVEIAQQLPGRSDNNIKNHWNTTKRRVQNK 129

  Fly   240 ERRSVNASGSDLKSSRTHLITLIKSGGISKCMNNMQHNKESG--GEAVNKSENAD 292
            ...:||..|:::..:....||:          ||....|..|  ||..|...:.|
plant   130 RGGTVNPVGNNILENYIRCITI----------NNEDFLKTDGSYGEPTNIESDDD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 8/35 (23%)
PLN03212 136..>236 CDD:178751 58/100 (58%)
Cmyb_C 388..>484 CDD:462753
MYB100NP_180095.1 PLN03091 21..>198 CDD:215570 72/165 (44%)
Blue background indicates that the domain is not in the aligned region.

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