DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and SNAPC4

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_003077.2 Gene:SNAPC4 / 6621 HGNCID:11137 Length:1469 Species:Homo sapiens


Alignment Length:736 Identity:155/736 - (21%)
Similarity:248/736 - (33%) Gaps:250/736 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TENGEELMNYGSNSDS---EESEYSENEDTQVCDKDSQQNSNADSGYPLD----SPELQDSKTTG 63
            :.:.||:..:..||:.   .:.|:|..|:.::      |...|..|: |:    :.||..|::..
Human   274 SRSAEEIRKFWQNSEHPSINKQEWSREEEERL------QAIAAAHGH-LEWQKIAEELGTSRSAF 331

  Fly    64 Q-----KGQNKSGKTSIGAVHPNYGFGKRWSKSEDVLLKQLVETHGENWEI-IGPH--------- 113
            |     :..||:.|.            |.|::.||.:|.|||:      |: :|.|         
Human   332 QCLQKFQQHNKALKR------------KEWTEEEDRMLTQLVQ------EMRVGSHIPYRRIVYY 378

  Fly   114 FKDRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERW 178
            .:.|...|:..||.|.|:|.|.||.|..:||..:::.|..:|.:.|..|...:.||...|||:|:
Human   379 MEGRDSMQLIYRWTKSLDPGLKKGYWAPEEDAKLLQAVAKYGEQDWFKIREEVPGRSDAQCRDRY 443

  Fly   179 HNHLNPNIKKTAWTEKEDEIIYQAHLELG-NQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERR 242
            ...|:.::||..|..||:|.:.:...:.| ..|||||..||.|:.:...:.|...|.:|..:.||
Human   444 LRRLHFSLKKGRWNLKEEEQLIELIEKYGVGHWAKIASELPHRSGSQCLSKWKIMMGKKQGLRRR 508

  Fly   243 -----------SVNASGSDLKSSRTHLITLIKSGGISKCMNNMQHNKES---------------- 280
                       |.::|||...|          |||.|...::.....|.                
Human   509 RRRARHSVRWSSTSSSGSSSGS----------SGGSSSSSSSSSEEDEPEQAQAGEGDRALLSPQ 563

  Fly   281 ----------------------------GGEAVNKSE---------NADGASVTAVKGGD----- 303
                                        ||.|.:.|.         .:..||.||...|:     
Human   564 YMVPDMDLWVPARQSTSQPWRGGAGAWLGGPAASLSPPKGSSASQGGSKEASTTAAAPGEETSPV 628

  Fly   304 ---------LAQESQDDHQKGSNLAHLSMQHL----IKLTMPRQTPIILKRTRKHIPETHHQAGC 355
                     :.:.:|..|...:..|....|.|    ..||:|.:|  :|:..|.:..    ...|
Human   629 QVPARAHGPVPRSAQASHSADTRPAGAEKQALEGGRRLLTVPVET--VLRVLRANTA----ARSC 687

  Fly   356 SSSETFNQEEAAGNARSRPPSSPVISPIKSLPFSPSHFLKS------------------------ 396
            :..|...|...       |.|||.:|...|:..|...:|:.                        
Human   688 TQKEQLRQPPL-------PTSSPGVSSGDSVARSHVQWLRHRATQSGQRRWRHALHRRLLNRRLL 745

  Fly   397 ------------PC---------LTTFEDMDLR--------ASTPVTKVYNRV-------GMEIK 425
                        ||         :.|..| .||        |||||..::.::       .:|:.
Human   746 LAVTPWVGDVVVPCTQASQRPAVVQTQAD-GLREQLQQARLASTPVFTLFTQLFHIDTAGCLEVV 809

  Fly   426 KEMETSSIETPHKSQLGPRTPTPFKKALAAIGKKRDGRRYEPSSPSSLVEDLAEIIHEEHLSNSL 490
            :|.:..   .|...|.|.|.|.......::..:...|..: |:.|:            :..|.|.
Human   810 RERKAL---PPRLPQAGARDPPVHLLQASSSAQSTPGHLF-PNVPA------------QEASKSA 858

  Fly   491 TANNSKMMGAADQNSTL-STEYNAQSPPHMKRARKSLLSTWSSNHPYNAGSAKRIQPFETE---- 550
            :...|:.:.::....|| .....|.:.|..|....|.|.           ..||:|.....    
Human   859 SHKGSRRLASSRVERTLPQASLLASTGPRPKPKTVSELL-----------QEKRLQEARAREATR 912

  Fly   551 ----TPSKFLTSPGDILKDTL 567
                .||:.|.|...||:..|
Human   913 GPVVLPSQLLVSSSVILQPPL 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 23/68 (34%)
PLN03212 136..>236 CDD:178751 33/100 (33%)
Cmyb_C 388..>484 CDD:462753 23/155 (15%)
SNAPC4NP_003077.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..82
SNAPC5-binding. /evidence=ECO:0000269|PubMed:11056176 84..133
SANT <262..305 CDD:473887 7/30 (23%)
Myb_DNA-bind_6 297..357 CDD:372817 17/78 (22%)
SANT 346..397 CDD:197842 17/68 (25%)
PLN03091 399..>502 CDD:215570 34/102 (33%)
SANT 401..448 CDD:197842 15/46 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..558 13/66 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..661 13/83 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..710 8/31 (26%)
PHA03247 <817..1215 CDD:223021 28/141 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..894 11/72 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 932..981 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1001..1051
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1167
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1184..1266
SNAPC2-binding. /evidence=ECO:0000269|PubMed:11056176 1281..1393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1430..1449
Blue background indicates that the domain is not in the aligned region.

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