DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and snapc4

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_009300052.3 Gene:snapc4 / 561241 ZFINID:ZDB-GENE-030131-5794 Length:1587 Species:Danio rerio


Alignment Length:382 Identity:93/382 - (24%)
Similarity:158/382 - (41%) Gaps:82/382 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 WSKSEDVLLKQLVETHGENWEIIG--------PHFK-DRLEQQVQQRWAKVLNPELIKGPWTRDE 143
            |::.||.||::|||...     ||        .||. .|...|:..||..||:|.|.||||:::|
Zfish   406 WTEEEDDLLRELVEKMR-----IGNFIPYIQMSHFMVGRDGSQLAYRWTSVLDPSLKKGPWSKEE 465

  Fly   144 DDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELG- 207
            |.::...|..:|.::|..|...:.||....||:|:.:.|...:||..|:..|.|::.:...:.| 
Zfish   466 DQLLRNAVAKYGTREWGRIRTEVPGRTDSACRDRYLDCLRETVKKGTWSYAEMELLKEKVAKYGV 530

  Fly   208 NQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSRTHLITLIKSGGISKCMN 272
            .:|||||..:|.|.|....:.|....|.|..::|...:.:.|..::.|..|:..:|        .
Zfish   531 GKWAKIASEIPNRVDAQCLHKWKLMTRSKKPLKRPLSSITTSYPRNKRQKLLKTVK--------E 587

  Fly   273 NMQHNKESGGEAVNKSENADGASVTAVKGGDLAQ-ESQDDHQKGSNLAHLSMQHLIKLTMPRQ-- 334
            .|..|..|..|:.....|:|       :..|||: |:.:..||.      .:|..:|..:||.  
Zfish   588 EMFFNSSSDDESQINYMNSD-------ESDDLAEDENLEIPQKE------YVQTEMKEWIPRNAM 639

  Fly   335 ----TP-------IILKRTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIKSLPF 388
                ||       :.|....:.:.|:..::|..|..:.|.        :.|...|::.       
Zfish   640 VWTITPGSFRTLWVRLPTNEEELRESTKESGLGSDSSENS--------ACPNDEPIME------- 689

  Fly   389 SPSHFLKSPCLTTFEDMD----------LRASTPVTKVYNRVGM-EIKKEMETSSIE 434
                  ::..|..|.|::          |...|...|...:|.| ::|:.::..:.|
Zfish   690 ------RNTILDRFGDVERTYVGMNTVVLHRRTDDEKAMFKVCMSDVKQFIQMKATE 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 26/67 (39%)
PLN03212 136..>236 CDD:178751 32/100 (32%)
Cmyb_C 388..>484 CDD:462753 10/58 (17%)
snapc4XP_009300052.3 None

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