DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and mybl1

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_005162808.1 Gene:mybl1 / 558540 ZFINID:ZDB-GENE-041111-281 Length:743 Species:Danio rerio


Alignment Length:837 Identity:239/837 - (28%)
Similarity:332/837 - (39%) Gaps:305/837 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LMNYGSNSDSEESEYSENEDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTGQKGQNKSGKTSIG 76
            :.|..|.|:.|:      ||....|.||::..|              ||.|..|           
Zfish     1 MANMKSRSEDED------EDRHSTDPDSREPKN--------------SKRTLCK----------- 34

  Fly    77 AVHPNYGFGKRWSKSEDVLLKQLVETHG-ENWEIIGPHFKDRLEQQVQQRWAKVLNPELIKGPWT 140
                     .:||:.||..||:|||..| :||::|..:|..|.:.|.|.||.|||||||:|||||
Zfish    35 ---------IKWSRDEDEKLKKLVEQQGTDNWKLIANYFPTRTDGQCQHRWQKVLNPELVKGPWT 90

  Fly   141 RDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLE 205
            ::||..||:||..:|||:|::||::|.|||||||||||||||||.:||::||::||.|||:||..
Zfish    91 KEEDQRVIELVHKYGPKRWSVIAKHLQGRIGKQCRERWHNHLNPEVKKSSWTQEEDRIIYEAHKR 155

  Fly   206 LGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVE------RRSVNASGSDLKSSRTHLIT---- 260
            |||:||:|:|.|||||||:||||||||||||.:.|      .:|.|:.....|..::....    
Zfish   156 LGNRWAEISKLLPGRTDNSIKNHWNSTMRRKVEHEGYLQEGNKSYNSDPGQKKRPKSSPTVEYPH 220

  Fly   261 ----LIKSG-----------GISKCMNNMQ----------HN----------------------- 277
                .|.||           ..::|:.|:.          |:                       
Zfish   221 DQNQPILSGQSQPPRYPYRSQSAQCLENINVRISSFVSPFHDDPDKEKRIKELELLLMSAESEVR 285

  Fly   278 KESGG------------------EAVNKSENADGASVTA-------------------------- 298
            ::||.                  |:|......||.||:.                          
Zfish   286 RQSGPRNPESYSSWSDSLPDDSVESVEDRGVEDGRSVSIPLPVSPSKFLAAEASAVLSTLETIPE 350

  Fly   299 --------------------VKGGDLAQESQDDHQKGSNLAHLSMQHLIKLTMPRQTPIILKRTR 343
                                |...||::....  .|.:|.|.:..:   .|..|...|.:...||
Zfish   351 FAETMELIDSVSRDPLAWSDVTSFDLSESGPS--PKPTNPADVCTE---TLAFPINAPTVQTMTR 410

  Fly   344 KHIPETHHQAGCSSSETFNQ----------------------EEAAGNARSRPPSSPVISPIKSL 386
            .....:..::|...:...|:                      ||.:.:......:||..:|:|.|
Zfish   411 PCAAVSQGKSGTLPNTCMNRFSSPPTSICRKKRREGGDQSPAEERSCSYIDNSGNSPKHTPVKGL 475

  Fly   387 PFSPSHF----------LKSPCLTTFEDMDLRASTPVTKVYNRVGMEI------------KKEME 429
            |||||.|          |.:|.||         ||||      .|.:.            |.:.|
Zfish   476 PFSPSQFFNVSGGEPLSLDNPALT---------STPV------CGQKCLLNTPHQKETTPKHQKE 525

  Fly   430 TSSIETP--HKSQL--GPRTPTPFKKALAAIGKKRDGRRYEPSSPSSLVEDLAEIIHEEHLSNSL 490
            .:...||  ||:.:  .||||||||.||||..|.....|..|...:.|.||:.|::.||..::..
Zfish   526 NAGFRTPKLHKNIVVHTPRTPTPFKNALAAQEKMHGPLRMVPQPLALLEEDIREVLKEETGADIF 590

  Fly   491 TANNSKMMGAADQNSTLSTEYNAQSPPHMKRARKSL-LSTWSSN------HPY----NAGSAKR- 543
            |         ..||......|.....| .::.|||| |.:|..:      .|.    |.|:..: 
Zfish   591 T---------QVQNQLQYRSYEQMEAP-ARKVRKSLVLDSWEKDCLNVQLFPQQQINNNGTTSQS 645

  Fly   544 ---------IQPF-ETETPSKFLTSPGDILKDTL---CSEQDLPFDEGRKEN-----------RP 584
                     :.|. |.|..|   .|| :.|||:|   ||..    .:|::||           .|
Zfish   646 DGLLTRSMLMMPLTEREENS---CSP-ESLKDSLSVVCSVS----PQGKRENMIQRSPLYQTPTP 702

  Fly   585 FHNRRINKYRGGLTYDHVIDPKWARVACGKSRDQMFMEEQA--YACLKNLSCISRSL 639
            .:|                  :|..|..||:.||:.|.|||  |......:||||:|
Zfish   703 ANN------------------EWDAVVFGKTEDQLIMTEQARRYLNPNPTACISRAL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 22/47 (47%)
Myb_DNA-bind_6 88..147 CDD:290632 33/59 (56%)
SANT 136..184 CDD:197842 33/47 (70%)
Myb_DNA-bind_6 139..197 CDD:290632 37/57 (65%)
SANT 188..235 CDD:197842 33/46 (72%)
Myb_DNA-binding 188..233 CDD:278669 31/44 (70%)
Cmyb_C 388..530 CDD:286408 51/168 (30%)
mybl1XP_005162808.1 SANT 36..82 CDD:197842 22/45 (49%)
Myb_DNA-bind_6 37..97 CDD:290632 33/59 (56%)
SANT 86..134 CDD:197842 33/47 (70%)
Myb_DNA-binding 86..132 CDD:278669 31/45 (69%)
SANT 138..185 CDD:197842 33/46 (72%)
Myb_DNA-binding 138..183 CDD:278669 31/44 (70%)
LMSTEN 245..287 CDD:285262 3/41 (7%)
Cmyb_C 477..638 CDD:286408 53/185 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586542
Domainoid 1 1.000 48 1.000 Domainoid score I11924
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 298 1.000 Inparanoid score I2694
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D119160at33208
OrthoFinder 1 1.000 - - FOG0000329
OrthoInspector 1 1.000 - - otm25274
orthoMCL 1 0.900 - - OOG6_100129
Panther 1 1.100 - - LDO PTHR45614
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2047
SonicParanoid 1 1.000 - - X1086
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.790

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