DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and Mybl1

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_038965321.1 Gene:Mybl1 / 297783 RGDID:1306940 Length:774 Species:Rattus norvegicus


Alignment Length:846 Identity:239/846 - (28%)
Similarity:340/846 - (40%) Gaps:287/846 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SASTENGEELMN----YGSNSDSEESEYSENEDTQVCDKDSQQNSNADSGYPLDSPELQDSKTTG 63
            |.|.:|...|..    :|.......|| .|::|.|..|.|            .:.|:        
  Rat     5 SRSRDNQNCLQTVAHIFGGMETGPHSE-DEDDDLQYADHD------------YEVPQ-------- 48

  Fly    64 QKGQNKSGKTSIGAVHPNYGFGKRWSKSEDVLLKQLVETHG-ENWEIIGPHFKDRLEQQVQQRWA 127
            |||..|....            .:|::.||..||:|||.|| ::|.:|..|.::|.:.|.|.||.
  Rat    49 QKGLKKLWNR------------VKWTRDEDDKLKKLVEQHGTDDWTLIASHLQNRSDFQCQHRWQ 101

  Fly   128 KVLNPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWHNHLNPNIKKTAWT 192
            |||||||||||||::||..||:||:.:|||:|:|||::|.|||||||||||||||||.:||::||
  Rat   102 KVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWT 166

  Fly   193 EKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDVERRSVNASGSDLKSSR-- 255
            |:||.|||:||..|||:||:|||.|||||||:||||||||||||.:.|....:...|:..||:  
  Rat   167 EEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEGYLQDGIKSERSSSKLQ 231

  Fly   256 -------THLIT----------------------------------------------------- 260
                   .||.|                                                     
  Rat   232 HKPCATMDHLQTQNQFYIPVQIPGYQYVSPDGNCVEHVQTSAFIQQPFVDEDPDKEKKIKELELL 296

  Fly   261 --------------------------LIKSGGISKCMNNM-QHNKE----SGGEAVNKSEN---- 290
                                      .:....:|..:||: :|..|    ...:.|:..:|    
  Rat   297 LMSAENEVRRKRLPPQPGSFSSWSGSFLMDDSMSNTLNNLEEHTTEFYSMDENQTVSAQQNSPTK 361

  Fly   291 ---------------------------ADGASVTAVKGGDLAQESQD------------DHQKG- 315
                                       :|..:.:.|...||:..:..            .|.:| 
  Rat   362 FLAVEANAVLSSLQTIPEFAETLELIESDPVAWSDVTSFDLSDAAASPVKSTPVKLMRIQHNEGA 426

  Fly   316 ----------------------SNLAHLSMQHLIKLTMPRQTPIIL-KRTRKHIPETHHQAGCSS 357
                                  |....|:..:::|.:.|   |.|| |:.|..:.::   ||...
  Rat   427 MECQFNVSLVLEGKKNSCNGGDSEAIPLASPNVVKFSTP---PTILRKKKRLRVGQS---AGSEL 485

  Fly   358 SETFNQEEAAGNARSRPPSSPVISPIKSLPFSPSHF-----------LKSPCLTTFEDMDLRAST 411
            .|....|  ..||..:.      :|:|:||||||.|           :::|..|         ||
  Rat   486 GEGSLSE--GNNAALKH------TPVKTLPFSPSQFFNTCPGSEQLNIENPSFT---------ST 533

  Fly   412 PVTKVYNRVGMEIKKE------METSSIETP--HKSQLG--PRTPTPFKKALAAIGKKRDGRRYE 466
            |:......:...::||      .|.....||  .:|.||  ||||||||.||||..||     |.
  Rat   534 PICGQKVLITTPLQKEATPKDQKENVGFRTPTIRRSILGTTPRTPTPFKNALAAQEKK-----YG 593

  Fly   467 P----SSP-SSLVEDLAEIIHEEHLSNSLTANNSKMMGAADQNS--TLSTEYNAQSPPHMKRARK 524
            |    |.| :.|.||:.|::.||       ......:...|:.:  :...|::|.    :|:.||
  Rat   594 PLKIVSQPLAFLEEDIREVLKEE-------TGTDIFLKEEDEPAYKSCKQEHSAS----VKKVRK 647

  Fly   525 SL-LSTWSSNHPYNAGSAKRIQPFETET--PSKFLTSPGDILKDTLCS----EQDLPFDEGRK-- 580
            || |.:|....|......:.|...::|.  .:..|..|...:.|..|:    :||:  :...|  
  Rat   648 SLALESWDKEEPGTQLLTEDISDMQSENILTTSLLMIPLLEIHDNRCNLTPEKQDI--NSANKTY 710

  Fly   581 ---ENRPFHNR-RINKYRGGLTYDHVIDPKWARVACGKSRDQMFMEEQAYACLKNL---SCISRS 638
               :.||..|. :..|....|.    .:.:|..|..||:.||:.|.|||...|...   |..||:
  Rat   711 TLTKKRPNPNTCKAVKLEKSLQ----SNCEWETVVYGKTEDQLIMTEQARRYLSTYTAPSSTSRA 771

  Fly   639 L 639
            |
  Rat   772 L 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 33/59 (56%)
PLN03212 136..>236 CDD:178751 73/99 (74%)
Cmyb_C 388..>484 CDD:462753 40/121 (33%)
Mybl1XP_038965321.1 Myb_DNA-bind_6 61..121 CDD:372817 33/59 (56%)
PLN03091 107..>215 CDD:215570 78/107 (73%)
LMSTEN 263..308 CDD:462332 0/44 (0%)
Cmyb_C 508..664 CDD:462753 53/180 (29%)

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