DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and Mybl2

DIOPT Version :10

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001417114.1 Gene:Mybl2 / 296344 RGDID:1308474 Length:705 Species:Rattus norvegicus


Alignment Length:762 Identity:219/762 - (28%)
Similarity:312/762 - (40%) Gaps:242/762 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LDSPELQDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRWSKSEDVLLKQLVETHG-ENWEIIGPHF 114
            ||....||  |.....:.:..|..:           :|:..||.||:.||...| ::|:.:..||
  Rat    10 LDELRYQD--TDSDLLEQRDNKCKV-----------KWTHEEDELLRALVRQFGQQDWKFLASHF 61

  Fly   115 KDRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNGRIGKQCRERWH 179
            .:|.:||.|.||.:||||:|:|||||::||..||:||:.:|.|:|||||::|.||:|||||||||
  Rat    62 PNRTDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWH 126

  Fly   180 NHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNSTMRRKYDV----- 239
            |||||.:||:.|||:||.||.:||..|||:||:|||.||||||||:|||||||::||.|.     
  Rat   127 NHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKVDTGGFPN 191

  Fly   240 ERRS---------------------VNASGS---------------------------------- 249
            |.|.                     |...||                                  
  Rat   192 ESRDCKPVYLLLELEDKDYQQNVQPVEGPGSLVSSWPLAPSTVKEEESSEEEAAVATTSKEHKQE 256

  Fly   250 ----DL------------------------------------------KSSRTHLITLIKSGGIS 268
                ||                                          :||.:..:.||:|...:
  Rat   257 PVPTDLGEVRTPEPLEFLKREYQEESSPETSLPYKWVVEAANLLIPAVESSLSEALDLIESDPDA 321

  Fly   269 KC-MNNMQHNKESGGE-AVNKS-------------ENADGASVTAVKGGDLAQESQDDHQKGSNL 318
            .| ::.....:|...| :||.|             :.|......|..|..:.:...|.|.. |:|
  Rat   322 WCDLSKFDLPEEPSAEGSVNSSPVQLQTPQQQQQHQQALSFHQAATPGPSVTEYRLDGHTI-SDL 385

  Fly   319 AHLSMQHLIKLTMPRQ--------TPIILKRTRKH----IPETHHQAGCSSSETFNQEEAAGNAR 371
            :..|...||.::...:        .|.:|||.:|.    .|.|.:.|..|..::.|         
  Rat   386 SRSSRGELIPISPSTEFGGSGIGTPPSVLKRQKKRRVALSPVTENSASLSFLDSCN--------- 441

  Fly   372 SRPPSSPVISPIKSLPFSPSHF-----------LKSPCLTTFEDMDLRASTPV------------ 413
            |..|.|   :|:|:||||||.|           |:||.||         ||||            
  Rat   442 SLTPKS---TPVKTLPFSPSQFLNFWNKQDTLELESPSLT---------STPVCSQKVVVTTPLH 494

  Fly   414 ---TKVYNRVGME-IKKEMETSSIETPHKSQLGPRTPTPFKKALAAIGKKRDGRRYEPSSP---- 470
               |.::.:.... :..:.:.|...|||       ||||||.||         .:|.|..|    
  Rat   495 RDKTPLHQKYPSRFVTPDQKYSMDNTPH-------TPTPFKNAL---------EKYGPLKPLPQT 543

  Fly   471 SSLVEDLAEIIHEEH-----LSNSLTANNSKMMGAADQNSTLSTEYNAQSPPHMKRARKSL-LST 529
            ..|.|||.|::..|.     :.:.:.....|.....           .:||  :|:.|||| |..
  Rat   544 PHLEEDLKEVLRSEAGIELIIEDDMRPEKQKRKPGL-----------RRSP--IKKVRKSLALDI 595

  Fly   530 WSSNHPYNAGSAKRIQPFETETPSKFLTSPGDILKDTLCSEQDLPFDEGRKENRPFHNRRINKYR 594
            ...:....:.::.:.....|..||   :|.|.||..  ..|.:...::|..:.:|.......|.|
  Rat   596 VDEDGKMMSSTSPKTLSLPTSVPS---SSSGFILPG--IKEDNSLLNQGFLQAKPEKVVATQKPR 655

  Fly   595 GGLTYDHVIDPKWARVACGKSRDQMFMEEQAYACLKNL--SCISRSL 639
            ..:.....:...|..||||.::||:||:|:|...|..|  |..||:|
  Rat   656 SHIPAPAPMTRAWKTVACGGTKDQLFMQEKARQLLGRLKSSHTSRTL 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 Myb_DNA-bind_6 88..147 CDD:372817 29/59 (49%)
PLN03212 136..>236 CDD:178751 69/99 (70%)
Cmyb_C 388..>484 CDD:462753 35/126 (28%)
Mybl2NP_001417114.1 None

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