DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myb and Dmtf1

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:XP_017447870.1 Gene:Dmtf1 / 114485 RGDID:70966 Length:760 Species:Rattus norvegicus


Alignment Length:667 Identity:134/667 - (20%)
Similarity:218/667 - (32%) Gaps:234/667 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TENGEEL-MNYGSNSDSEESEYSENEDTQVCDKDSQQNSNADSGYPLDSPEL------------- 56
            :||.:.. :...:.::..:.|.||...||:   ...||...|...||.:.|:             
  Rat    79 SENDQSFEVTMTATTEVADDELSEGTVTQI---QILQNDQLDEMSPLGTEEVSAVSQAWFTTKED 140

  Fly    57 QDSKTTGQKGQNKSGKTSIGAVHPNYGFGKRWSKSE-DVL------------------------- 95
            :||.|      ||..|...|          .|||.| |:|                         
  Rat   141 KDSLT------NKGHKWKQG----------MWSKEEIDILMNNIERYLKARGIKDATEIIFEMSK 189

  Fly    96 ---------------------------------------------LKQLVETHGENWEIIGPHFK 115
                                                         ||:|...||.:|..||... 
  Rat   190 DERKDFYRTIAWGLNRPLFAVYRRVLRMYDDRNHVGKYTPEEIEKLKELRIKHGNDWATIGAAL- 253

  Fly   116 DRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNFGPKK----------WTLIARYLNGRI 170
            .|....|:.| .:::......|.||.:|:..:.::|......:          |..:|..:..|.
  Rat   254 GRSASSVKDR-CRLMKDTCNTGKWTEEEEKRLAEVVHELTSTEPGDIVTQGVSWAAVAERVGTRS 317

  Fly   171 GKQCRERWHNHLN-PNIKKTAWTEKEDE---IIYQAHLELGNQ----WAKIAKRLPGRTDNAIKN 227
            .||||.:|.|:|| .....|.|| ||||   |:..|.|::.::    |..:|:            
  Rat   318 EKQCRSKWLNYLNWKQSGGTEWT-KEDEINLILRIAELDVADENDINWDLLAE------------ 369

  Fly   228 HWNST-----MRRKYDVERRSVNASGSDLKSSRTHLITLIKSGGISKCMNNMQHN-----KESGG 282
            .|:|.     :|.|:...:|.: |:..|:.     ...|||  |:.:...|.::|     .:||.
  Rat   370 GWSSVRSPQWLRSKWWTIKRQI-ANHKDVS-----FPVLIK--GLKQLHENQKNNPVLLENKSGS 426

  Fly   283 EAVNKSENADGASV----------TAVKGGDLAQESQDDHQKGSNLAHLSMQHLIKLTMPRQTPI 337
            ...|.:.|:....|          ||:....:|.     .|....:.|:|.......::..:| |
  Rat   427 GVPNSNCNSSVQHVQIRVARLEDNTAISPSPMAA-----LQIPVQITHVSSTDSPAASVDSET-I 485

  Fly   338 ILK----RTRKHIPETHHQAGCSSSETFNQEEAAGNARSRPPSSPVISPIKSLPFSPSHFL---K 395
            .|.    :|.:.:|..|.|...:......|..::........:||.::...:.|.||...:   .
  Rat   486 TLNSGTLQTFEILPSFHLQPTGTPGTYLLQTSSSQGLPLTLTTSPTVTLAAAAPASPEQIIVHAL 550

  Fly   396 SP--CLTTFEDMDLRASTPVTKVYNRVGME-IKKEMETSSIETP--------HKSQLGPRTPTPF 449
            ||  .|.|.:::.::..||      ||.:: :..|..||||...        |.|..        
  Rat   551 SPEHLLNTSDNVTVQCHTP------RVIIQTVATEDITSSISQAELTADSDLHSSDF-------- 601

  Fly   450 KKALAAIGKKRDGRRYEPSSPSSLVED-LAEIIHEEHLSNSLTANNSKMMGAADQNST------- 506
                             |..|.:|..| ..:.|....::...:.||:.:...:|||||       
  Rat   602 -----------------PEPPDALEADTFPDEIPRPKMTIQPSFNNAHVSKYSDQNSTELMNSVM 649

  Fly   507 LSTEYN------AQSPP 517
            :.||..      .|.||
  Rat   650 VRTEEEIADTDLKQEPP 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 17/117 (15%)
Myb_DNA-bind_6 88..147 CDD:290632 21/129 (16%)
SANT 136..184 CDD:197842 16/58 (28%)
Myb_DNA-bind_6 139..197 CDD:290632 20/68 (29%)
SANT 188..235 CDD:197842 14/58 (24%)
Myb_DNA-binding 188..233 CDD:278669 14/56 (25%)
Cmyb_C 388..530 CDD:286408 34/158 (22%)
Dmtf1XP_017447870.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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