DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myb and ttf1.2

DIOPT Version :9

Sequence 1:NP_511170.1 Gene:Myb / 32543 FlyBaseID:FBgn0002914 Length:657 Species:Drosophila melanogaster
Sequence 2:NP_001353684.1 Gene:ttf1.2 / 100334190 ZFINID:ZDB-GENE-100921-87 Length:567 Species:Danio rerio


Alignment Length:479 Identity:89/479 - (18%)
Similarity:143/479 - (29%) Gaps:230/479 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TENGEELMNYGSNSDSEES----------------------------EYSENEDTQVCDKDSQQN 42
            ||:.||    .:.||.|||                            |:..|  |.:   :||.:
Zfish   134 TEHEEE----PNTSDDEESGPPDVVIGTGWRKSRKIPVDLKLLAELKEFCPN--TAI---ESQSD 189

  Fly    43 SNADSGYPLDSPELQDSKTTG--------QKGQNKSGKTSIGAV-------------HPN----- 81
            :..:.....|.|..::.|..|        .|.:|:..:.::..:             ||.     
Zfish   190 TEINKMIKYDLPRFREFKKQGIAMRHGRFSKAENEKLRQNVSDLLALTQLKDAVMLFHPKRFLNE 254

  Fly    82 ----------YGF------------------GKR----------WSKSEDVLLKQLVETHGENWE 108
                      |||                  ||:          :::.||..|.:....:|.||:
Zfish   255 EMKLAELKRMYGFYQKIAEGIPRPCHDVYTRGKKMFDHRHYKGNFTEEEDKRLLKYYNLYGPNWK 319

  Fly   109 IIGPHFKDRLEQQVQQRWAKVLNPELIKGPWTRDEDDMVIKLVRNF-------------GPKK-- 158
            .|... ..|....:::|:.::.:.:. |||||.:|...:::.||..             .||:  
Zfish   320 KISEK-TGRSSFSLRKRFPQISSVKR-KGPWTPEEVQRLLRAVREHVLSVLKSANPNKKKPKRVR 382

  Fly   159 ---------WTLIARYLNGRIGKQCRERWHNHLNPNIKK-TAWTEKED--------EIIYQAHLE 205
                     ||.||..:..|..:||||:|.:.|...:.. |.:..|..        :.:|:..:|
Zfish   383 REILYENLPWTTIADKVETRCYRQCREKWMSILFTRMSSGTTFRGKAGLLAKIRLIKAMYEMQVE 447

  Fly   206 -------------LGN--------QWAKIAKRLPGRTDNAIKNH----WNSTMRRKYDVERRSVN 245
                         .||        .|.|            |||:    |||          ||  
Zfish   448 DVADIDWESLTAAFGNVPPAHVQKMWRK------------IKNYYLPDWNS----------RS-- 488

  Fly   246 ASGSDLKSSRTHLITLIKSGGISKCMNNMQHNKESGGEAVNKSENADGASVTAVK---------- 300
                 .|.:.:||...|....:|.|                     .|..|.|||          
Zfish   489 -----FKDNVSHLHKNILPCLVSSC---------------------KGFDVNAVKVEQKELFRLS 527

  Fly   301 ---------GGDLAQESQDDHQKG 315
                     |.|:.::.||..:.|
Zfish   528 KIFKDIEEDGQDIEEDGQDIEEDG 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MybNP_511170.1 SANT 85..132 CDD:197842 11/56 (20%)
Myb_DNA-bind_6 88..147 CDD:290632 15/58 (26%)
SANT 136..184 CDD:197842 21/71 (30%)
Myb_DNA-bind_6 139..197 CDD:290632 20/90 (22%)
SANT 188..235 CDD:197842 14/80 (18%)
Myb_DNA-binding 188..233 CDD:278669 14/78 (18%)
Cmyb_C 388..530 CDD:286408
ttf1.2NP_001353684.1 Myb_DNA-bind_6 299..356 CDD:316443 15/58 (26%)
Myb_DNA-binding 345..415 CDD:306708 20/69 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5147
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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