DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8578 and Lrrfip2

DIOPT Version :9

Sequence 1:NP_001285302.1 Gene:CG8578 / 32540 FlyBaseID:FBgn0030699 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_008764838.1 Gene:Lrrfip2 / 301035 RGDID:1306234 Length:748 Species:Rattus norvegicus


Alignment Length:746 Identity:196/746 - (26%)
Similarity:276/746 - (36%) Gaps:365/746 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TGRRRNNM--RINAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKE----------- 58
            :||:|..:  |.:|||.||..|.:||||||||:|.||||||:||||||||||:|           
  Rat     6 SGRKRTPVKDRFSAEDEALSNIAREAEARLAAKRAARAEARDIRMRELERQQREPSHHSFDRKWG 70

  Fly    59 -----------------------------------------------QEITA------------- 63
                                                           ::||.             
  Rat    71 EIHKWLEDSERAQYSHRSGYRSGYRRSYLGVEDTLSLRSLGSHRSSSKDITGTHWSRASTPKRRD 135

  Fly    64 -------DR--------------------------------VFDMQNSTAV-----------GSE 78
                   ||                                .||.:|.:::           .|.
  Rat   136 MMYDSIKDRSSRVSSLSRSYSHSLGMKKRPSGSHKDPLSGLYFDQRNYSSLRHSKPASTYYFRSS 200

  Fly    79 TLSAHPV------------------------RLAYGGLLN-------------VTRASASRRS-- 104
            :|.:.|:                        .|..|||.|             .:|||:||.|  
  Rat   201 SLCSEPMGTSKSQSRASPTVTSGLLRSSSLASLHGGGLYNPYGSRTPSEYSYCSSRASSSRSSPV 265

  Fly   105 ----------SED---------------------------------------SVEE--------- 111
                      |.|                                       |::|         
  Rat   266 PFDDDTASIVSSDRASRGRRESLVSAADYFSRSNRRGSIVSEVDDAGIADLTSLDEKSDKQYAEN 330

  Fly   112 ------------------------------------------------------EGR---SFRDF 119
                                                                  |||   ..::.
  Rat   331 YTRPSSRNSASATTPLSGNSSRRGSGDTSSLIDPDTSLSELRDIYDLKDQIHDVEGRYMQGLKEL 395

  Fly   120 KHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMEESYAQLQREFKEKMRD------ 178
            |..|.:|||:::|||::||||||::.:..|:|..|||..|..||..|:..||.:||.::      
  Rat   396 KESLSEVEEKYKKAMVSNAQLDNEKNNLIYQVDTLKDVIEEQEEQMAEFYRENEEKSKELERQKH 460

  Fly   179 -CNALKRNLDRANLELK--------LVQ------------------------------GQL---- 200
             |:.|:..:|    |||        |::                              |.|    
  Rat   461 MCSVLQHKMD----ELKEGLRQRDELIEENQRLQQKVDTMTKEVFDLQETLLWKDKTIGALEKQK 521

  Fly   201 -------NERDSL------------IAEQGLLIVAVENADGSDAKR-------ALVSVENAKVLA 239
                   ||||.|            .||:..|::..|:....|...       ..||.|.|:||.
  Rat   522 EHIACLRNERDVLREELADLQQTVKTAEKHGLVIIPESTPNGDVNHEPVVGAITAVSQEAAQVLE 586

  Fly   240 SV-QGSLDVRLKKFSDEKQRLLAEVQKLHEQLDE-----YKSDGISG-RRSLSQGSFGDENDYEA 297
            |. :|.|||||:|.::||..||::::||..||:|     .::||:|| ...|..||  |....|.
  Rat   587 SAGEGPLDVRLRKLAEEKDELLSQIRKLKLQLEEERQKCSRNDGMSGDLAGLQNGS--DLQFIEM 649

  Fly   298 QRETNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAELKLERRKLQREHR 362
            ||:.|:.||::|:||.||||:||.|:.|::|.|.||:|||:.||.|||.|.|||.|:||||||.|
  Rat   650 QRDANRQISEYKFKLSKAEQDIATLEQSISRLEGQVLRYKTAAENAEKIEDELKAEKRKLQRELR 714

  Fly   363 ELLEKLEEAETSNNHLLKRLDKLKNAKSAIL 393
            ...:|:||.|.:|:||.|||:|:|..::|:|
  Rat   715 TAQDKIEEMEMTNSHLAKRLEKMKANRTALL 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8578NP_001285302.1 DUF2051 47..321 CDD:286781 130/630 (21%)
Lrrfip2XP_008764838.1 DUF2051 319..673 CDD:286781 95/359 (26%)
MreC 463..>585 CDD:302802 22/125 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348961
Domainoid 1 1.000 164 1.000 Domainoid score I3846
eggNOG 1 0.900 - - E1_KOG2010
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22476
Inparanoid 1 1.050 257 1.000 Inparanoid score I3076
OMA 1 1.010 - - QHG45893
OrthoDB 1 1.010 - - D1434475at2759
OrthoFinder 1 1.000 - - FOG0002905
OrthoInspector 1 1.000 - - oto96807
orthoMCL 1 0.900 - - OOG6_108791
Panther 1 1.100 - - O PTHR19212
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1677
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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