DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8578 and lrrfip1

DIOPT Version :9

Sequence 1:NP_001285302.1 Gene:CG8578 / 32540 FlyBaseID:FBgn0030699 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_012826429.2 Gene:lrrfip1 / 100489033 XenbaseID:XB-GENE-980980 Length:1101 Species:Xenopus tropicalis


Alignment Length:634 Identity:140/634 - (22%)
Similarity:223/634 - (35%) Gaps:272/634 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GRRR--NNMRINAEDNALDQITKEAEARLAARRQARAEAREIRMRELERQQKE------------ 58
            ||:|  |..|::|||.||:||.:||||||||:|.||||||||||:||||||||            
 Frog     7 GRKRHPNQERLSAEDQALNQIAREAEARLAAKRAARAEAREIRMKELERQQKEIYQVQKKYYGLD 71

  Fly    59 ----------------------------------------------------------------- 58
                                                                             
 Frog    72 AKWGDIEQWMEDSERYSHRARRTQQGADDDDLMSVGSRSSLRTNGYEDELLGATQYRKSSRSSTG 136

  Fly    59 --QEITADRVFDMQNST-----AVGSETLSAHPVRLAYGG----LLNVTR--------------- 97
              :...:.|......||     ::.|.:|::.|.:..:.|    |||...               
 Frog   137 SGETYQSSRAPPQDESTYYSDMSLASASLTSKPQQAMHNGNRPSLLNCNTLPSRSQRSSLYDDGI 201

  Fly    98 ASASRRSSEDS------------------------------------------------------ 108
            ||.|||.|..|                                                      
 Frog   202 ASGSRRYSSSSSKPPSEYSCYLGSGSRASSRASSARASPVNSEPPGSTVFRRGSACGSVSTLSHV 266

  Fly   109 --------VEE------------------------------------------------------ 111
                    |||                                                      
 Frog   267 DDVPPVFGVEERPEKDFSEKGSRPVSSLSAATLASLGGTSSRRGSGDTSISVDTEASIREIKEIS 331

  Fly   112 ---------EGR---SFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEIMEES 164
                     |||   ..::.|..|.:|||:::::|:|||||||::.|..|:|..|:|....:||.
 Frog   332 ELKDQIEDVEGRYMQGLKEMKDSLAEVEEKYKRSMVTNAQLDNEKTSLQYQVDTLRDVLLELEEE 396

  Fly   165 YAQLQREFKEKMRDCNALKRNLDRANLELKLVQGQLNERDSLIAEQGLLIVAVENADGS--DAKR 227
            .|:.:|:.:||.::|...|...:....:|..::..|.:|:.|:.|...|....||::..  |.|.
 Frog   397 LAESRRQHEEKNKECERQKHEHNVLRFQLAELKDALEQREQLLTEIRQLQQKQENSECEICDLKE 461

  Fly   228 ALVSVENAKVLASVQGSLDVRLKKFSD----EKQRLLAEVQKLHEQLDEYKSDGISGRRSLSQGS 288
            . :..::.|:     |:|: |.|:|.|    |:..|..||..|.|:|   |..||:....     
 Frog   462 T-IEWKDKKI-----GALE-RQKEFFDPVRCERDDLREEVSHLREEL---KKHGIALDSE----- 511

  Fly   289 FGDENDYEAQRETNKIISDHKYKLQKAEQEIANLQSSLARSETQVIRYKSTAEAAEKAEAELKLE 353
              |..:.:|..|.:.:...|....|||        ::|.:::...:|.:..:..:::|:|..:.|
 Frog   512 --DTPNGDASIEPHIVEECHMESPQKA--------TALGKADESDVREQEISVVSQRAQAGHEQE 566

  Fly   354 RRK---LQREHRELLEKLEEA---ETSNNHL--LKRLDKLKNAKSAILK 394
            |.|   .:::..|..||..|.   :.:||::  .:|:.:|.:..|..||
 Frog   567 REKEPVAEQDREEEQEKTPEEFPFQAANNNVTDFQRIQELTSNNSVELK 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8578NP_001285302.1 DUF2051 47..321 CDD:286781 94/510 (18%)
lrrfip1XP_012826429.2 LRRFIP 275..553 CDD:401617 68/302 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1434475at2759
OrthoFinder 1 1.000 - - FOG0002905
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19212
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1677
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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