DRSC/TRiP Functional Genomics Resources

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Protein Alignment ArgRS and MSR1

DIOPT Version :9

Sequence 1:NP_573081.1 Gene:ArgRS / 32539 FlyBaseID:FBgn0027093 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_011959.1 Gene:MSR1 / 856491 SGDID:S000001133 Length:643 Species:Saccharomyces cerevisiae


Alignment Length:576 Identity:160/576 - (27%)
Similarity:252/576 - (43%) Gaps:112/576 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 ATELKGH------CPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVKPPEVI------- 194
            |.||..|      |...|           |:..||.:.|       |:::.|  |.::       
Yeast   127 AIELSTHGCIGKVCAKGP-----------FLQFFLDQRY-------LIQSTV--PNILLQKGKYG 171

  Fly   195 ------KKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLI 253
                  :|:|:|:||||||||..|.|||||||||..|..|.|.:...|.|:|:|||||.|||:|.
Yeast   172 QKKSRHQKKVVVEFSSPNIAKPFHAGHLRSTIIGGFLSNLYEAMGWSVTRMNYLGDWGRQFGLLA 236

  Fly   254 AHLEDRFPNYLNE----SPPISDLQLFYKESKKRFDEDE-------EFKKRAYSRVVSLQKGVPN 307
            .    .|..|.:|    ..||..|...|.:......::|       .....|.|...:|:.|..|
Yeast   237 V----GFKRYGDEKTLQKQPIQHLFDVYVKINMDLAKEEINGNSKCGISGEARSFFKNLENGDEN 297

  Fly   308 SIKAWELICNVSRKEFQTIYERLDISVK-ERGES-FYQSRMLSVVEYLRGKGLLEVDEGREIM-- 368
            :||.|....::|...:...|.||:|:.. ..||| ..:..|...::..|...|::..:|..::  
Yeast   298 AIKIWNRFRSLSIHHYIQTYSRLNINFDIFSGESQVSKESMNEALDIFRKNNLVKEIDGALVIDL 362

  Fly   369 --WPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAER 431
              |   :|....:.:.||||...|.|.|:.|...|.:....|.::||:.|.|..:.:..|     
Yeast   363 TQW---SKRLGRVVVQKSDGTTLYLTRDVGAAIERKKNLHFDKMVYVISSQQDLYMSQFF----- 419

  Fly   432 SAILNPLSHR----VDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQLESRGR--DK 490
             .||..::..    :.|:.||:|.|     ..||.|:.|.|..:|||...::||.:|:...  .:
Yeast   420 -MILKKMNFEWAKDLQHINFGMVQG-----MSTRKGNVVFLDTILDEARDKALQIMENNKMKISQ 478

  Fly   491 VLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRICSIARNSG 555
            |..||.:.|.   :....|...|:...||::|.|::::||...|:|..||.||::|:.|:.|.|.
Yeast   479 VDNPQRVADL---IGVSAIIIQDMKSKRINNYEFNWNRMLSFEGDTGPYLQYTHSRLRSLERTSS 540

  Fly   556 E---------DFTNL--PEILKKTNIVLDHEKEWKLAKTLLKLHDILIKCSKELFLHFLCEFCFE 609
            :         ||:||  |:::             :|.:.|.:..|:|.:..:......:..:.|:
Yeast   541 DFTTDMLIHADFSNLNEPQLV-------------ELVRLLAQYPDVLRRAFETQEPATIVTYLFK 592

  Fly   610 VCTVFTEFYDSCYCIEKNKQGDIIGVNHSRILLCEATAAVLRQCFYILGLKPVSKM 665
            ||...:..|...:.  ..|..||.   ..|:.:..|:..||.....:|||.||.:|
Yeast   593 VCHQVSSCYKKIWV--SGKPADIA---IPRLAVYSASRQVLHNAMSLLGLVPVDRM 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArgRSNP_573081.1 Arg_tRNA_synt_N 81..171 CDD:214975 7/33 (21%)
PLN02286 83..665 CDD:215160 159/574 (28%)
ArgRS_core 197..463 CDD:185675 89/286 (31%)
DALR_1 540..665 CDD:214846 32/135 (24%)
MSR1NP_011959.1 argS 69..643 CDD:273085 159/574 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343010
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0018
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60659
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100350
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1455
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.680

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