DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArgRS and Dalrd3

DIOPT Version :9

Sequence 1:NP_573081.1 Gene:ArgRS / 32539 FlyBaseID:FBgn0027093 Length:665 Species:Drosophila melanogaster
Sequence 2:XP_011241203.1 Gene:Dalrd3 / 67789 MGIID:1915039 Length:545 Species:Mus musculus


Alignment Length:623 Identity:112/623 - (17%)
Similarity:206/623 - (33%) Gaps:194/623 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 ITEHLESVFRQAIASAFPE-FRDTPV-------IIAPVNSTSAKFGDYQ----------CNNAMG 125
            :.|.||:: ..|:....|. |::|..       .:||.::..|:|.|.|          |....|
Mouse     8 VGETLEAL-NAAVGPGSPVWFKETHARHLRVRDFLAPRSALQARFRDGQVPECVFRAVSCLQGPG 71

  Fly   126 LSKKLKEKGINKAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVKP 190
            ::..|:     .||......|:...||  :.|  .:.||       ...||:.|         ||
Mouse    72 VAPVLR-----CAPTPAGLSLQLQRPA--VFE--HVLGA-------LASYATPA---------KP 111

  Fly   191 ----PEVIKKRVLVDFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGM 251
                |.|:.....:..:|..    :.:..||:.::.:.|.|:|.                 ..|:
Mouse   112 ASPGPRVVLHCPALRCNSGT----LRLSQLRAVLVADHLVRVLR-----------------AHGV 155

  Fly   252 LIAHLEDRFPNYLNESPPISDLQLFYKESKKRFDEDEEFKKRAY-------------SRVVSLQK 303
            .:..:           ||:.|..:.....|.|.:.....|..:.             |:..:|..
Mouse   156 RVCSV-----------PPVRDPHMSTFLQKLRVEWPTASKSTSTETLRTCVLANLNGSKEATLPP 209

  Fly   304 GVPNSIKAWELICNVSRKEFQTIYERLDISVKERGESFYQSRMLSVVEYLRGKGLLEV-DEGREI 367
            ||...:...||                   |::||.:.|..   |:...|..:.:|.| .|.:|.
Mouse   210 GVLGRLCLKEL-------------------VEQRGTAGYDP---SIDHCLVTEDVLSVLSELQEA 252

  Fly   368 M--WPDDTKTGIPLTIVKSDGGFTYDTSDMAAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAE 430
            :  ||:.   |.|....:.|.|    ..|..             :|:||...::      |:..:
Mouse   253 VRHWPEG---GHPGPAGRPDAG----VDDCV-------------VIHVVSCEEA------FQQQK 291

  Fly   431 RSAILNPLSHRVDHVQFGVVLGEDGKKFKTRSGDTVKLSDLLDEGMKRSLQQLESRGRDKVLTPQ 495
            ...:...|..|..|.|..:|.|            .||::.:  .|.:.:..|.......:|....
Mouse   292 LDLLWQKLDDRAPHKQKHLVCG------------PVKMAGV--PGTQLTAPQYYRLRHAQVCEAS 342

  Fly   496 ELKD----AQES--------LAYGCIKYSDLCHNRISDYIFSFDKMLEDRGNTAVYLLYTYTRIC 548
            .||.    ||:.        |:...||:..|.....|..:.:...:......:..:::|...|:.
Mouse   343 ALKHGGDLAQDPAWTETFDILSVATIKFEMLSTAPQSQLLLAHSTISTKGTKSGTFVMYNCARLA 407

  Fly   549 SI---ARNSGED--FTNLPEILKKTNIVLDHEKEWKLA-KTLLKLHDIL---IKCSKELFLH--- 601
            ::   .::..|.  :...|.:......:|..|.||.|. .::|...|:|   :..:....||   
Mouse   408 TLFEGYKHGTEQGLYPTFPLVSSLDFSLLHDEGEWLLLFNSVLPFLDLLSQTVSLAGTPGLHIPV 472

  Fly   602 ---FLCEFCFEVCTVFTEFYDSCYCIEKNKQGDIIGVN 636
               .:|:|..::...|:.:|:..:         |:||:
Mouse   473 RTEMVCKFLVQLSMDFSSYYNRVH---------ILGVS 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArgRSNP_573081.1 Arg_tRNA_synt_N 81..171 CDD:214975 24/107 (22%)
PLN02286 83..665 CDD:215160 111/619 (18%)
ArgRS_core 197..463 CDD:185675 46/281 (16%)
DALR_1 540..665 CDD:214846 21/112 (19%)
Dalrd3XP_011241203.1 DALR_1 399..>499 CDD:214846 19/108 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0018
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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