DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ArgRS and Rars1

DIOPT Version :10

Sequence 1:NP_573081.1 Gene:ArgRS / 32539 FlyBaseID:FBgn0027093 Length:665 Species:Drosophila melanogaster
Sequence 2:NP_001099247.2 Gene:Rars1 / 287191 RGDID:1309215 Length:660 Species:Rattus norvegicus


Alignment Length:661 Identity:369/661 - (55%)
Similarity:484/661 - (73%) Gaps:16/661 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KLRELELKTQGLAARIQTAKSGEQLDV--DLVQLQIENKKLKNRLFILKKSIAEESTAAGGDVSK 72
            :|.:.|.:.:.|.|.|...|:...|:.  .|.||:.||.|||.||.||::|:..|.       .:
  Rat    11 RLLQQEKEIKSLTAEIDRLKNCSYLEASPSLEQLREENLKLKYRLNILRRSLQAER-------KR 68

  Fly    73 P-KESSSITEHLESVFRQAIASAFPEFRDTPVIIAPVNSTSAKFGDYQCNNAMGLSKKLKEKGIN 136
            | |...:|...|:.:|..||.:|:|:..:.|:::.|  |...||||||||:|||:|:.||.|...
  Rat    69 PTKNMININSRLQELFGCAIKAAYPDLENPPLVVTP--SQQPKFGDYQCNSAMGISQMLKAKEQK 131

  Fly   137 KAPRDIATELKGHCPASPIIEKLEIAGAGFVNVFLSKDYASLALSNLLRNGVKPPEV-IKKRVLV 200
            .:||:||..:..|.|.:..|:::||||.||:||.|.||:.|..|:|||.|||:.|.: ..::|:|
  Rat   132 VSPREIAENITKHLPNNEYIDRVEIAGPGFINVHLRKDFVSEQLTNLLVNGVQLPVLGENEKVIV 196

  Fly   201 DFSSPNIAKQMHVGHLRSTIIGESLCRLLEFLQHDVIRINHLGDWGTQFGMLIAHLEDRFPNYLN 265
            |||||||||:||||||||||||||:.||.||..::|:|:||:||||||||||||||:|:||:||.
  Rat   197 DFSSPNIAKEMHVGHLRSTIIGESMSRLFEFAGYNVLRLNHVGDWGTQFGMLIAHLQDKFPDYLT 261

  Fly   266 ESPPISDLQLFYKESKKRFDEDEEFKKRAYSRVVSLQKGVPNSIKAWELICNVSRKEFQTIYERL 330
            .||||.|||.||||||||||.:||||||||..||.||...|:.:|||.|||:|||:||..||:.|
  Rat   262 VSPPIGDLQAFYKESKKRFDTEEEFKKRAYECVVLLQSKNPDIMKAWNLICDVSREEFNKIYDAL 326

  Fly   331 DISVKERGESFYQSRMLSVVEYLRGKGLLEVDEGREIMWPDDTKTGIPLTIVKSDGGFTYDTSDM 395
            ||::.||||||||.||..:|:....||.::||:||:|::...  ..:||||||||||:||||||:
  Rat   327 DITLIERGESFYQDRMKDIVKEFEDKGFVQVDDGRKIVFVPG--CSVPLTIVKSDGGYTYDTSDL 389

  Fly   396 AAIRHRLEEELCDWIIYVVDSGQSTHFNTIFKAAERSAILNPLSHRVDHVQFGVVLGEDGKKFKT 460
            |||:.||.||..:.||||||:||:|||.|:|.||:.....:|...||.||.||||||||.|||||
  Rat   390 AAIKQRLFEEKANKIIYVVDNGQATHFQTVFAAAQMIGWYDPKVTRVAHVGFGVVLGEDKKKFKT 454

  Fly   461 RSGDTVKLSDLLDEGMKRSLQQLESRGRDKVLTPQELKDAQESLAYGCIKYSDLCHNRISDYIFS 525
            |||:||:|.|||:||::||:.:|:.:.||||||.:|||.||.|:|||||||:||.|||::||:||
  Rat   455 RSGETVRLMDLLEEGLRRSMDKLKEKERDKVLTEEELKAAQTSVAYGCIKYADLSHNRLNDYVFS 519

  Fly   526 FDKMLEDRGNTAVYLLYTYTRICSIARNSGEDFTNLPEILKKTNIVLDHEKEWKLAKTLLKLHDI 590
            |||||:||||||.||||.:|||.||||.:..|...|....::|.|:|||||||||.:.:|:..:|
  Rat   520 FDKMLDDRGNTAAYLLYAFTRIRSIARLANIDEEMLQRAARETKIILDHEKEWKLGRCILRFPEI 584

  Fly   591 LIKCSKELFLHFLCEFCFEVCTVFTEFYDSCYCIEKNKQ-GDIIGVNHSRILLCEATAAVLRQCF 654
            |.|...:||||.||::.:|:.|.||||||||||:||::| |.::.||..|:|||||.|||:.:.|
  Rat   585 LQKILDDLFLHTLCDYIYELATTFTEFYDSCYCVEKDRQTGKVLKVNMWRMLLCEAVAAVMAKGF 649

  Fly   655 YILGLKPVSKM 665
            .|||:|||.:|
  Rat   650 DILGIKPVQRM 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArgRSNP_573081.1 PLN02286 83..665 CDD:215160 344/583 (59%)
Rars1NP_001099247.2 Could be involved in the assembly of the multisynthetase complex. /evidence=ECO:0000250 1..72 22/67 (33%)
PLN02286 80..660 CDD:215160 344/583 (59%)
'HIGH' region. /evidence=ECO:0000250 201..212 9/10 (90%)
Interaction with tRNA. /evidence=ECO:0000250|UniProtKB:Q05506 529..543 10/13 (77%)

Return to query results.
Submit another query.