DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8565 and SRPK4

DIOPT Version :9

Sequence 1:NP_573080.1 Gene:CG8565 / 32538 FlyBaseID:FBgn0030697 Length:790 Species:Drosophila melanogaster
Sequence 2:NP_566977.1 Gene:SRPK4 / 824469 AraportID:AT3G53030 Length:529 Species:Arabidopsis thaliana


Alignment Length:617 Identity:190/617 - (30%)
Similarity:282/617 - (45%) Gaps:129/617 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 NNDNAEGSGFDRQESANEYVIGGYHPVAIGDVF-VNRYHVFKKLGWGHFSTVWLCYDTQMDRYCA 230
            |:|..|.:..|  |...:|..||||.|.|||.| ..||.|..||||||||||||.:|||..||.|
plant     7 NSDGGEYTSED--EGTEDYRRGGYHAVRIGDSFKTGRYVVQSKLGWGHFSTVWLSWDTQSSRYVA 69

  Fly   231 VKVSKSAQVYKETGIDEIMLFSQMSLHDQHKYRSHVVGFYDFFEITGPHGRHICLVLEVLGDNLL 295
            :||.||||.|.|..:|||.:..|::..|....:. ||...|.|:.:||:|:|:|:|.|.||||||
plant    70 LKVQKSAQHYTEAAMDEITILQQIAEGDTDDTKC-VVKLLDHFKHSGPNGQHVCMVFEYLGDNLL 133

  Fly   296 KVIERCFYKGMPISNIKQIAQQVLTGLKFLHEECGIIHTDLKPENVLLASNEVSVRTEIKTAIEV 360
            .:|:...|:|:||..:|:|...:|.||.:||::..|||||||||||||.|.....:...|:...:
plant   134 TLIKYSDYRGLPIPMVKEICYHMLVGLDYLHKQLSIIHTDLKPENVLLPSTIDPSKDPRKSGAPL 198

  Fly   361 YLKANEGK--LSPSSKMTKTAKRRMQAKSKKVISFFKNHRRMLRRQGIEDLLYLAE----RGLIE 419
            .|..::..  :..:....|..|.....|:|            |..||..:.....|    ||:..
plant   199 VLPTDKDNTVVDSNGDFVKNQKTGSHRKAK------------LSAQGHAENKGNTESDKVRGVGS 251

  Fly   420 PITAAMAVSDNLPFIPFGFDGFMMMSDADCRTVQNSKLPEMEGMEYKCDRINLCLKSPELFLRYV 484
            |:......::.             ..:.||.:  .|...|::|.|                    
plant   252 PVNGKQCAAEK-------------SVEEDCPS--TSDAIELDGSE-------------------- 281

  Fly   485 LDIIKNLDEKELSTQDKRRRFTQASGRGQTKKNAR-SRLRLASNAAYTTGTGWRSNRKINLNDIY 548
                                    .|:...||.:| ||..|.::|                    
plant   282 ------------------------KGKQGGKKGSRSSRRHLVASA-------------------- 302

  Fly   549 PIDPANNECDVRVKIADLGNACYFHHHFTDDIQTKEYRALEVILGAGYCETADIWSVACLLWELA 613
                     |::.|:.|.||||:.:..||.||||::||..|||||:.|..:||:||.||:.:||.
plant   303 ---------DLKCKLVDFGNACWTYKQFTSDIQTRQYRCPEVILGSKYSTSADLWSFACICFELV 358

  Fly   614 TGTYLFDTHSKRGKYNLDEVHIAKIVETCGRIPWYLIRKGKHSRNFINSAGKLCNIETLKPLKLA 678
            ||..|||.|| ...|:.||.|:|.::|..|.:|..:...|::||:|.|..|.|.:|..|:...:.
plant   359 TGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRHGDLRHIRRLRFWPMN 422

  Fly   679 NILIRWYGWRTRQSTEFVNFLMPMLQTNPLSRISASKALESHYLCNIALPGIDIDSYYYYSVREI 743
            .:|...|.:..:.:.:..:||:.:|...|..|.:|::.|              :..:.....|.|
plant   423 KVLTEKYEFSEQDANDLSDFLVSILDFVPEKRPTAAQCL--------------LHPWINSGPRSI 473

  Fly   744 KDCTHTKSERNSDEDSSSCSSIDSSEFSSDEV 775
            |.   :..:.|||:..:..:..::.|..:.||
plant   474 KP---SLKDENSDKLDTEKNKRENEEQEAVEV 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8565NP_573080.1 PKc_like 192..722 CDD:304357 171/537 (32%)
SRPK4NP_566977.1 STKc_SRPK 31..466 CDD:271038 171/550 (31%)
S_TKc 42..466 CDD:214567 165/539 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1290
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm979
orthoMCL 1 0.900 - - OOG6_100556
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.780

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