DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8565 and srpk1

DIOPT Version :9

Sequence 1:NP_573080.1 Gene:CG8565 / 32538 FlyBaseID:FBgn0030697 Length:790 Species:Drosophila melanogaster
Sequence 2:NP_001017351.1 Gene:srpk1 / 550105 XenbaseID:XB-GENE-941978 Length:611 Species:Xenopus tropicalis


Alignment Length:680 Identity:232/680 - (34%)
Similarity:333/680 - (48%) Gaps:137/680 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 IEQRAKRPKICKKRCKQKRRMPSSLSDDGIAGRKPAKINKYSELSYGSESSMPFEMKQQSNDNQN 166
            ::.|.||.|..|...||:....:|:.:                    :|..:|          :.
 Frog     8 LQARKKRTKAKKVPKKQEATQHASVRE--------------------TEGVLP----------EE 42

  Fly   167 NNDNAEGSGFDRQESANEYVIGGYHPVAIGDVFVNRYHVFKKLGWGHFSTVWLCYDTQMDRYCAV 231
            :.:...||..|.||..|:|..||||.|.|||:|..||||.:||||||||||||..|.|..|:.|:
 Frog    43 DEEEILGSDDDEQEDPNDYCKGGYHHVKIGDLFCGRYHVIRKLGWGHFSTVWLSRDLQAKRFVAM 107

  Fly   232 KVSKSAQVYKETGIDEIMLFSQMSLHD-QHKYRSHVVGFYDFFEITGPHGRHICLVLEVLGDNLL 295
            ||.|||:.|.||.:|||.|...:...| ....|..||...|.|:|:|.:|.|:|:|.||||.:||
 Frog   108 KVVKSAEHYTETALDEIKLLRSVRNTDPTDPNRERVVQLLDDFKISGANGTHVCMVFEVLGHHLL 172

  Fly   296 KVIERCFYKGMPISNIKQIAQQVLTGLKFLHEECGIIHTDLKPENVLLASNEVSVRTEIKTAIEV 360
            |.|.:..|:|:|:..:|.|.:|||.||.:||.:|.|||||:||||:||:.:|..:|   :.|.|.
 Frog   173 KWIIKSNYQGVPLPCVKSIIRQVLQGLDYLHSKCQIIHTDIKPENILLSVSETFIR---RLAAEA 234

  Fly   361 YLKANEGKLSP-------------SSKMTKTAKRRMQAKSKKVISFFKNHRRMLRRQGI------ 406
            ......|...|             |:||:|..||:::.|.|:.....:.     |.|.|      
 Frog   235 TEWQRSGAPPPSGSAVSTAPPPKQSTKMSKNKKRKLKKKQKRQAELLEK-----RVQEIEEMDRE 294

  Fly   407 -----EDLLYLAERGLIEPITAAMAVSDNLPFIPFGFDGFMMMSDADCR-------TVQNSKLPE 459
                 ||....|:....:|.|                ..:...|:.:|.       :..|.:|| 
 Frog   295 DENQDEDSTEQAQETWTDPDT----------------HSYSRGSELNCNGLTSEIPSENNERLP- 342

  Fly   460 MEGMEYKC-----------------DRINLCLKSPELFLRYVLDII----------KNLDEKELS 497
             :...|.|                 |...|||.:.|..|....::|          |:::.:|:|
 Frog   343 -QNNTYSCTVTSSSSLDSPCEQPREDPNPLCLDTEENNLPNAGEVILSQTSAVQSHKHIENEEIS 406

  Fly   498 TQDKRRRFTQASGRGQTKKNARSRLRLASNAAYTTGTGWRSNRKINLNDIYPIDPANNECDVRVK 562
            ...:..|....|    .::.....:::::|.             :.||   |::|.|.| .::||
 Frog   407 KLQESIRKEMCS----EEQEGSPAMKISANT-------------LLLN---PLEPQNAE-HLKVK 450

  Fly   563 IADLGNACYFHHHFTDDIQTKEYRALEVILGAGYCETADIWSVACLLWELATGTYLFDTHSKRGK 627
            ||||||||:...|||:||||::||:|||::|:||...|||||.||:.:|||||.|||:.||.. .
 Frog   451 IADLGNACWVQKHFTEDIQTRQYRSLEVLIGSGYSTPADIWSTACMAFELATGDYLFEPHSGE-N 514

  Fly   628 YNLDEVHIAKIVETCGRIPWYLIRKGKHSRNFINSAGKLCNIETLKPLKLANILIRWYGWRTRQS 692
            |:.||.|||.|:|..||||..||..||:|:.|....|.|.:|..|||..|.::|:..|.|....:
 Frog   515 YSRDEDHIALIIELLGRIPRKLIVAGKYSKEFFTKKGDLKHISKLKPWGLYDVLVEKYEWAEEDA 579

  Fly   693 TEFVNFLMPMLQTNPLSRISASKALESHYL 722
            ..|.:|:||||:..|..|.:||:.|...:|
 Frog   580 AGFTDFVMPMLELAPEKRATASQCLNHPWL 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8565NP_573080.1 PKc_like 192..722 CDD:304357 210/588 (36%)
srpk1NP_001017351.1 STKc_SRPK1 68..609 CDD:271118 210/588 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D290680at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm49543
Panther 1 1.100 - - O PTHR24055
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

Return to query results.
Submit another query.