DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8565 and nmo

DIOPT Version :9

Sequence 1:NP_573080.1 Gene:CG8565 / 32538 FlyBaseID:FBgn0030697 Length:790 Species:Drosophila melanogaster
Sequence 2:NP_001356976.1 Gene:nmo / 38890 FlyBaseID:FBgn0011817 Length:439 Species:Drosophila melanogaster


Alignment Length:557 Identity:96/557 - (17%)
Similarity:153/557 - (27%) Gaps:282/557 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 YHPVAI-GDVFVNRYHVFKKLGWGHFSTVWLCYDTQMDRYCAVK--------VSKSAQVYKETGI 245
            |.|.|: .||..:|     .:|:|.|..||...|.:..|..|:|        :..|.:|::|..:
  Fly    31 YQPPAVPQDVQPDR-----PIGYGAFGVVWAVTDPRDGRRVALKKLPNVFQSLVSSKRVFRELKM 90

  Fly   246 -----DEIMLFSQMSLHDQHKYRSHVVGFYDFFEITGPHGRHICLVLEVLGDNLLKVIERCFYKG 305
                 .|.:|.:...|...|         .|||:       .|.::.|:|..:|.|:|  ...:.
  Fly    91 LCFFKHENVLSALDILQPPH---------LDFFQ-------EIYVITELLQSDLHKII--VSPQH 137

  Fly   306 MPISNIKQIAQQVLTGLKFLHEECGIIHTDLKPENVLLASNEVSVRTEIKTAIEVYLKANEGKLS 370
            :...:||....|:|.|||:|| ...|:|.|:||.|:|:.||.|                      
  Fly   138 LSADHIKVFLYQILRGLKYLH-SARILHRDIKPGNLLVNSNCV---------------------- 179

  Fly   371 PSSKMTKTAKRRMQAKSKKVISFFKNHRRMLRRQGIEDLLYLAERGLIEPITAAMAVSDNLPFIP 435
                                                                        |....
  Fly   180 ------------------------------------------------------------LKICD 184

  Fly   436 FGFDGFMMMSDADCRTVQNSKLPEMEGMEYKCDRINLCLKSPELFLRYVLDIIKNLDEKELSTQD 500
            ||                                                  :..::|.:     
  Fly   185 FG--------------------------------------------------LARVEEPD----- 194

  Fly   501 KRRRFTQASGRGQTKKNARSRLRLASNAAYTTGTGWRSNRKINLNDIYPIDPANNECDVRVKIAD 565
                        |.|                                                  
  Fly   195 ------------QAK-------------------------------------------------- 197

  Fly   566 LGNACYFHHHFTDDIQTKEYRALEVILGA-GYCETADIWSVACLLWELATGTYLFDTHSKRGKYN 629
                     |.|.::.|:.|||.|:::|| .|....|:|||.|:..||.....||...:...:..
  Fly   198 ---------HMTQEVVTQYYRAPEILMGARHYSSAVDVWSVGCIFGELLGRRILFQAQNPVQQLE 253

  Fly   630 LDEVHIAKIVET---------CGRIPWYLIRKGKHSRNFINSAGKLCNIETLKPLKLANILIRWY 685
            |    |.:::.|         |.....:::|:.....:|                   ::|   |
  Fly   254 L----ITELLGTPTMEDMRHACEGARTHMLRRAPKPPSF-------------------SVL---Y 292

  Fly   686 GWRTRQSTEFVNFLMPMLQTNPLSRISASKALESHYL 722
            ...:..:.|.|:.|..||..:|..|||.:.||...||
  Fly   293 TLSSHATHEAVHLLCQMLVFDPDKRISVTDALAHPYL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8565NP_573080.1 PKc_like 192..722 CDD:304357 93/553 (17%)
nmoNP_001356976.1 STKc_NLK 39..411 CDD:173748 93/549 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442176
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24055
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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