DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8565 and Srpk3

DIOPT Version :10

Sequence 1:NP_573080.1 Gene:CG8565 / 32538 FlyBaseID:FBgn0030697 Length:790 Species:Drosophila melanogaster
Sequence 2:XP_006229620.1 Gene:Srpk3 / 293854 RGDID:727856 Length:593 Species:Rattus norvegicus


Alignment Length:636 Identity:235/636 - (36%)
Similarity:314/636 - (49%) Gaps:84/636 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 CKKRCKQKRRMPSSLSDDGIAGRKPAKINKYSELSYGSESS-------MPFEMKQQSNDNQNNND 169
            |.:......||  |.|..|..|......:..|:.|.|.|||       .|.....|         
  Rat    15 CTRALGCDTRM--SASAGGSGGMDCGGSSSSSQTSCGPESSSSELAPATPAPRLLQ--------- 68

  Fly   170 NAEGSGFDRQESANEYVIGGYHPVAIGDVFVNRYHVFKKLGWGHFSTVWLCYDTQMDRYCAVKVS 234
            ...||..:.||...:|..|||:||.|||:|..||||.:|||||||||||||:|.|..|:.|:||.
  Rat    69 GLLGSDDEEQEDPKDYCKGGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVV 133

  Fly   235 KSAQVYKETGIDEIMLFSQMSLHD-QHKYRSHVVGFYDFFEITGPHG--RHICLVLEVLGDNLLK 296
            |||..|.||.:|||.|...:...| ....|..:|...|.|.|:|.:|  ..:|:||||||..|||
  Rat   134 KSAGHYTETAVDEIKLLKCVRDSDPSDPKRETIVQLIDDFRISGVNGVRPDVCMVLEVLGHQLLK 198

  Fly   297 VIERCFYKGMPISNIKQIAQQVLTGLKFLHEECGIIHTDLKPENVLLASNEVSVRTEIKTAIEVY 361
            .|.:..|:|:|:..:|.|.:|||.||.:||.:|.|||||:||||:||...:..:|   :.|.|..
  Rat   199 WIIKSNYQGLPVPCVKSIVRQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIR---RLAAEAT 260

  Fly   362 LKANEGKLSPSSKMTKTAKRRMQAKSKKVISFFKNHRRMLRRQGIEDLLYLAER----GLIEPIT 422
            .....|...||.....||.:.:....|    ..||.|:.:||:..:....|.||    ..:|.:.
  Rat   261 EWQQSGAQPPSRSTVSTAPQEVLQTGK----LSKNKRKKMRRKRKQQKRLLEERLRDLQRLEAME 321

  Fly   423 AAMAVSDNLPFIPFGFDGFMMMSDADCRTVQNSKLPEMEGMEYKCDRI--NLCLKSPELFLRYVL 485
            ||                 :...|:..|..|.|......|...:..|.  :....||        
  Rat   322 AA-----------------VQTEDSSSRLEQGSGSTSSSGCHPEGTRAGPSPASSSP-------- 361

  Fly   486 DIIKNLDEKELSTQDKRRRFTQASG-RGQTKKNAR-SRLRLASNAAYTTGT-------GWRSNRK 541
              :....|:.||..      :|.|| .|.....|. |.|..:||...|.|.       | .||..
  Rat   362 --VPTGGERSLSPS------SQTSGFSGSLFSTASCSVLSGSSNQRETGGLLSPSTPFG-ASNLL 417

  Fly   542 INLNDIYPIDPANNECDVRVKIADLGNACYFHHHFTDDIQTKEYRALEVILGAGYCETADIWSVA 606
            :|     |::|.|.: .:::|||||||||:.|.|||:||||::|||:||::||.|...|||||.|
  Rat   418 VN-----PLEPQNAD-KIKIKIADLGNACWVHKHFTEDIQTRQYRAVEVLIGAEYGPPADIWSTA 476

  Fly   607 CLLWELATGTYLFDTHSKRGKYNLDEVHIAKIVETCGRIPWYLIRKGKHSRNFINSAGKLCNIET 671
            |:.:|||||.|||:.||.. .|:.||.|||.|||..|.||......|::||.|.|..|:|.:|..
  Rat   477 CMAFELATGDYLFEPHSGE-DYSRDEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHN 540

  Fly   672 LKPLKLANILIRWYGWRTRQSTEFVNFLMPMLQTNPLSRISASKALESHYL 722
            ||...|..:|:..|.|...|:|:|..||:||::..|..|.||:..|:..:|
  Rat   541 LKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWL 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8565NP_573080.1 Protein Kinases, catalytic domain 192..722 CDD:473864 211/547 (39%)
Srpk3XP_006229620.1 Protein Kinases, catalytic domain 91..591 CDD:473864 211/547 (39%)

Return to query results.
Submit another query.