| Sequence 1: | NP_001096993.1 | Gene: | Chc / 32537 | FlyBaseID: | FBgn0000319 | Length: | 1678 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_082780.1 | Gene: | Clhc1 / 73324 | MGIID: | 1920574 | Length: | 596 | Species: | Mus musculus |
| Alignment Length: | 486 | Identity: | 108/486 - (22%) |
|---|---|---|---|
| Similarity: | 189/486 - (38%) | Gaps: | 124/486 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 121 LVTETSVFHWSMEGD-----SMPQKMFDRHSSLNG---CQIINYRCNASQQWLLLVGISALPSRV 177
Fly 178 AGAMQLYSVERKVSQAIE----GHAASF---ATFKIDANKEPTTLFCFAVRT-ATGGKLHIIE-- 232
Fly 233 -------VGAPPNGNQPFAKKAVDVFFPP-EAQNDFP-VAMQVSAKYDTI-----YLITKYGYIH 283
Fly 284 L-YDMETATCIYMNRISADTIFVTAPHEA---SGGIIGVNRKGQVLSVTVDEE------QIIPYI 338
Fly 339 NT--VLQN-----PDLALRMAVRNNLAGAEDL--------------------FVRKFNKLFTAGQ 376
Fly 377 YAEAAKVAALAPKAILRTPQTIQRFQQVQTPAGSTTPPLLQYFGILLDQGK-----LNKFESLEL 436
Fly 437 CRPVLLQGKKQLCEKWLKEEKLECSEELGDLV----------KASDLTLALSIYLRANVPNKVIQ 491
Fly 492 CFAETGQFQKI---VLYAKKVNYTPDYVFLL 519 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Chc | NP_001096993.1 | Clathrin_propel | 19..56 | CDD:279702 | |
| Clathrin_propel | 148..187 | CDD:279702 | 7/41 (17%) | ||
| Clathrin_propel | 198..234 | CDD:279702 | 13/48 (27%) | ||
| Clathrin_propel | 256..288 | CDD:279702 | 10/38 (26%) | ||
| Clathrin_propel | 296..330 | CDD:279702 | 6/36 (17%) | ||
| Clathrin-link | 331..353 | CDD:286367 | 7/34 (21%) | ||
| Clathrin_H_link | 364..422 | CDD:290550 | 20/57 (35%) | ||
| CLH | 542..672 | CDD:128594 | |||
| Clathrin | 546..679 | CDD:279031 | |||
| CLH | 687..825 | CDD:128594 | |||
| Clathrin | 697..827 | CDD:279031 | |||
| CLH | 834..969 | CDD:128594 | |||
| Clathrin | 844..971 | CDD:279031 | |||
| CLH | 980..1118 | CDD:128594 | |||
| Clathrin | 984..1120 | CDD:279031 | |||
| CLH | 1129..1266 | CDD:128594 | |||
| Clathrin | 1134..1268 | CDD:279031 | |||
| CLH | 1275..1417 | CDD:128594 | |||
| Clathrin | 1279..1417 | CDD:279031 | |||
| CLH | 1428..1579 | CDD:128594 | |||
| Clathrin | 1429..1562 | CDD:279031 | |||
| Clhc1 | NP_082780.1 | TSNAXIP1_N | 30..145 | CDD:374065 | 31/133 (23%) |
| Clathrin_H_link | 308..365 | CDD:372748 | 20/57 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167849975 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0985 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.830 | |||||