| Sequence 1: | NP_001096993.1 | Gene: | Chc / 32537 | FlyBaseID: | FBgn0000319 | Length: | 1678 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_017454630.1 | Gene: | Clhc1 / 289865 | RGDID: | 1307937 | Length: | 595 | Species: | Rattus norvegicus |
| Alignment Length: | 489 | Identity: | 106/489 - (21%) |
|---|---|---|---|
| Similarity: | 194/489 - (39%) | Gaps: | 131/489 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 121 LVTETSVFHWSMEGD-----SMPQKMFDRHSSLNG--CQIINYRCNASQQWLLLVGISALPSRVA 178
Fly 179 GAMQLYSVERKVSQAIE----GHAASF---ATFKIDANKEPTTLFCFAVRT-ATGGKLHIIEVGA 235
Fly 236 PPNGNQPFAKKAVDVFFPPEAQ-----NDFPVAMQVSAK-----------YDTIYLITKYGYIHL 284
Fly 285 YDMETATCIYMNRISAD--TIFVTAPHEA---SGGIIGVNRKG----------------QVLSVT 328
Fly 329 VD----EEQIIPYINTVLQNPDLALRMAVRNNLAGAEDLF----------------VRKFNKLFT 373
Fly 374 AGQYAEAAKVAALAPKAILRTPQTIQRFQQVQTPAGSTTPPLLQYFGILLDQGK-----LNKFES 433
Fly 434 LELCRPVLLQGKKQLCEKWLKEEKLECSEELGDLV----------KASDLTLALSIYLRANVPNK 488
Fly 489 VIQCFAETGQFQKI---VLYAKKVNYTPDYVFLL 519 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Chc | NP_001096993.1 | Clathrin_propel | 19..56 | CDD:279702 | |
| Clathrin_propel | 148..187 | CDD:279702 | 7/40 (18%) | ||
| Clathrin_propel | 198..234 | CDD:279702 | 12/39 (31%) | ||
| Clathrin_propel | 256..288 | CDD:279702 | 7/47 (15%) | ||
| Clathrin_propel | 296..330 | CDD:279702 | 11/54 (20%) | ||
| Clathrin-link | 331..353 | CDD:286367 | 4/21 (19%) | ||
| Clathrin_H_link | 364..422 | CDD:290550 | 20/73 (27%) | ||
| CLH | 542..672 | CDD:128594 | |||
| Clathrin | 546..679 | CDD:279031 | |||
| CLH | 687..825 | CDD:128594 | |||
| Clathrin | 697..827 | CDD:279031 | |||
| CLH | 834..969 | CDD:128594 | |||
| Clathrin | 844..971 | CDD:279031 | |||
| CLH | 980..1118 | CDD:128594 | |||
| Clathrin | 984..1120 | CDD:279031 | |||
| CLH | 1129..1266 | CDD:128594 | |||
| Clathrin | 1134..1268 | CDD:279031 | |||
| CLH | 1275..1417 | CDD:128594 | |||
| Clathrin | 1279..1417 | CDD:279031 | |||
| CLH | 1428..1579 | CDD:128594 | |||
| Clathrin | 1429..1562 | CDD:279031 | |||
| Clhc1 | XP_017454630.1 | TSNAXIP1_N | 30..144 | CDD:406226 | 32/142 (23%) |
| Clathrin_H_link | 307..361 | CDD:404683 | 18/54 (33%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166353654 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG0985 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.830 | |||||