DRSC/TRiP Functional Genomics Resources

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Protein Alignment sd and Tead4l1

DIOPT Version :10

Sequence 1:NP_001368984.1 Gene:sd / 32536 FlyBaseID:FBgn0003345 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_006237485.1 Gene:Tead4l1 / 689519 RGDID:1591108 Length:170 Species:Rattus norvegicus


Alignment Length:191 Identity:83/191 - (43%)
Similarity:101/191 - (52%) Gaps:46/191 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 HLFVQLGGKPSFSDPLLETVDIRQIFDKFPEKSGGLKDLYEKGPQNAFYLVKCWADLNTDLTTGS 309
            ||.....|  ||..|||| |....:.||     |...|...:.       :..||          
  Rat    26 HLIAATSG--SFPFPLLE-VSACLVTDK-----GERPDFISRN-------LLGWA---------- 65

  Fly   310 ETGDFYGVTSQYESNENVVLVCSTIVCSFGKQVVEKVESEYSRLENNRYVYRIQRSPMCEYMINF 374
                       :...|.::.:|          |....::|::|.||..|:|||.|||:|||||||
  Rat    66 -----------WAGGEGILSLC----------VPGIPQTEFARYENGHYLYRIHRSPLCEYMINF 109

  Fly   375 IQKLKNLPERYMMNSVLENFTILQVMRARETQETLLCIAYVFEVAAQNSGTTHHIYRLIKE 435
            |.|||:|||:|||||||||||||||:..|:||||||||||||||:|...|..||||.|.||
  Rat   110 IHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIYCLRKE 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdNP_001368984.1 TEA 88..155 CDD:128703
YBD 224..432 CDD:435993 80/186 (43%)
Tead4l1XP_006237485.1 YBD <82..167 CDD:435993 61/84 (73%)
Blue background indicates that the domain is not in the aligned region.

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