DRSC/TRiP Functional Genomics Resources

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Protein Alignment sd and egl-44

DIOPT Version :9

Sequence 1:NP_001368984.1 Gene:sd / 32536 FlyBaseID:FBgn0003345 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_001343767.1 Gene:egl-44 / 174005 WormBaseID:WBGene00001208 Length:493 Species:Caenorhabditis elegans


Alignment Length:500 Identity:191/500 - (38%)
Similarity:259/500 - (51%) Gaps:101/500 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NNLSCSELEVA--EKTEQQAVGPGTIPSPWTPVN-------AGPPGALGSADTNGSMVDSKNLDV 74
            |::.||||:.|  :.:|..||...||.:...|.|       ||..|......|:|..:.:.:...
 Worm     2 NSMFCSELQQALPQMSEDVAVTAQTILNGTPPHNHFRKEWLAGAAGTTTPTTTSGGQMMTLSPPA 66

  Fly    75 GD--------MSDDEKDLS--SADAEGVWSPDIEQSFQEALSIYPPCGRRKIILSDEGKMYGRNE 129
            ||        ..:....||  |.|||||||.||:|:|||||:|||||||||||:|||||||||||
 Worm    67 GDGPGSAGSMAPESTSSLSDLSGDAEGVWSIDIDQAFQEALAIYPPCGRRKIIISDEGKMYGRNE 131

  Fly   130 LIARYIKLRTGKTRTRKQVSSHIQVLARRKLREIQAKIKVQF-WQPGLQPSTSQDIKP------- 186
            |||||||||.||||||||||||||||||:|||:.|||.||.| ...|..||..|...|       
 Worm   132 LIARYIKLRCGKTRTRKQVSSHIQVLARKKLRDEQAKKKVPFHLNTGDIPSLLQQASPPGGVKSP 196

  Fly   187 ----FP---------------------------------------------QPPYPAGKTSTAV- 201
                ||                                             .|..|.|...:.: 
 Worm   197 SAVVFPPVSAAVAAITEISPQSSYSSIVPKVETDQISQQLFKSLPLWSFQQTPGLPIGMDLSQLV 261

  Fly   202 ----SGDETGIP-PSQLPWEGRAIATHKFRLLEFTAFMEIQRDEIYHRHLFVQLGGKPSFSDPLL 261
                |.|:|..| .|::..|.:.||:.:..|..|:|:::..:..:  |...|::.......|   
 Worm   262 FQQSSPDKTVSPVKSEVVEETKPIASSQLTLHSFSAYVKCNKTSL--RTELVKIENTLEKDD--- 321

  Fly   262 ETVDIRQIFDKFPEKSGGLKDLYEKG-PQNAFYLVKCWADLN-TDLTTGSETGDFYGVTSQYESN 324
              :||...::|:|:.   |::|:||. .::.|:|.||||::| :|.....:    |.|.|.|.|.
 Worm   322 --IDISVFYEKYPKL---LRELFEKSEKKDVFFLAKCWANINVSDDVQNCQ----YAVDSFYSSR 377

  Fly   325 ENVVLVCSTIVCSFGKQVVEKVESEYSRLE-NNRYVYRIQRSPMCEYMINFIQKLKNLPERYMMN 388
            |...|..||:.||||.|.|||:| :|..:| :..|.:.:..||||:||:.||.:||.|.....||
 Worm   378 EKFQLKVSTMACSFGNQAVEKIE-QYFPIEFDGSYSFILNNSPMCDYMVKFIAELKKLNVIETMN 441

  Fly   389 SVLENFTILQVMRARETQETLLCIAYVFEVAAQNSGTTHHIYRLI 433
            :||||||:||::...||.|.|:.:.:|||| :|....:..:||||
 Worm   442 NVLENFTVLQIVTNSETDELLMVLCFVFEV-SQEPEPSCSVYRLI 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdNP_001368984.1 TEA 88..155 CDD:128703 60/66 (91%)
YBD 224..432 CDD:407601 74/210 (35%)
egl-44NP_001343767.1 TEA 90..157 CDD:128703 60/66 (91%)
YBD 288..484 CDD:375293 74/211 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165431
Domainoid 1 1.000 126 1.000 Domainoid score I3367
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2418
Inparanoid 1 1.050 255 1.000 Inparanoid score I1955
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52403
OrthoDB 1 1.010 - - D355519at33208
OrthoFinder 1 1.000 - - FOG0001013
OrthoInspector 1 1.000 - - oto17748
orthoMCL 1 0.900 - - OOG6_103264
Panther 1 1.100 - - LDO PTHR11834
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2507
SonicParanoid 1 1.000 - - X674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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