DRSC/TRiP Functional Genomics Resources

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Protein Alignment sd and tead1b

DIOPT Version :9

Sequence 1:NP_001368984.1 Gene:sd / 32536 FlyBaseID:FBgn0003345 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_009301856.1 Gene:tead1b / 100006454 ZFINID:ZDB-GENE-091013-5 Length:433 Species:Danio rerio


Alignment Length:435 Identity:254/435 - (58%)
Similarity:293/435 - (67%) Gaps:78/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 MSDDEKDLSSADAEGVWSPDIEQSFQEALSIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGK 141
            |||........||||||||||||||||||:|||||||||||||||||||||||||||||||||||
Zfish     1 MSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGK 65

  Fly   142 TRTRKQVSSHIQVLARRKLREIQAKIKVQ------------------------------------ 170
            ||||||||||||||||:|:|||||.|||.                                    
Zfish    66 TRTRKQVSSHIQVLARKKVREIQAAIKVSSHIQVLARRKSRELHSKLKVTSMDQSVKDKALQTMA 130

  Fly   171 --------------------------------FWQ---PGLQPSTSQDIKPFPQPPYP--AGKTS 198
                                            |||   |..||.:|||||||.|..||  ...|:
Zfish   131 SMSSAQIVSATAIHNKLGLPGIPRPAFPGAAGFWQGMIPTGQPGSSQDIKPFAQQAYPIQPAVTT 195

  Fly   199 TAVSGDETGIPPSQLP-WEGRAIATHKFRLLEFTAFMEIQRD-EIYHRHLFVQLG-GKPSFSDPL 260
            |..|.:....|...:| |:||:|.|.|.||:||:||:|.||| :.|::||||.:| ...|::|.|
Zfish   196 TISSYEPPTAPAPTVPAWQGRSIGTSKLRLVEFSAFLEHQRDPDSYNKHLFVHIGQTNHSYNDAL 260

  Fly   261 LETVDIRQIFDKFPEKSGGLKDLYEKGPQNAFYLVKCWADLNTDLTTGSETGDFYGVTSQYESNE 325
            ||:||||||:||||||.||||:|:.|||||:|:|:|.|||||.::.  .|||.||||||||||.|
Zfish   261 LESVDIRQIYDKFPEKKGGLKELFGKGPQNSFFLIKFWADLNCNIQ--DETGAFYGVTSQYESPE 323

  Fly   326 NVVLVCSTIVCSFGKQVVEKVESEYSRLENNRYVYRIQRSPMCEYMINFIQKLKNLPERYMMNSV 390
            |:.:.|||.|||||||||||||:||:|.||.|:||||.||||||||||||.|||:|||:||||||
Zfish   324 NMTITCSTKVCSFGKQVVEKVETEYARFENGRFVYRISRSPMCEYMINFIHKLKHLPEKYMMNSV 388

  Fly   391 LENFTILQVMRARETQETLLCIAYVFEVAAQNSGTTHHIYRLIKE 435
            |||||||.|:..|:|||||||:|.||||:....|..||||||:||
Zfish   389 LENFTILLVVTNRDTQETLLCMACVFEVSNSEHGAQHHIYRLVKE 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sdNP_001368984.1 TEA 88..155 CDD:128703 65/66 (98%)
YBD 224..432 CDD:407601 143/209 (68%)
tead1bXP_009301856.1 TEA 12..79 CDD:128703 65/66 (98%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593114
Domainoid 1 1.000 296 1.000 Domainoid score I1445
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 465 1.000 Inparanoid score I1512
OMA 1 1.010 - - QHG52403
OrthoDB 1 1.010 - - D355519at33208
OrthoFinder 1 1.000 - - FOG0001013
OrthoInspector 1 1.000 - - otm24686
orthoMCL 1 0.900 - - OOG6_103264
Panther 1 1.100 - - O PTHR11834
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X674
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

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