DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8509 and RRD2

DIOPT Version :9

Sequence 1:NP_573079.1 Gene:CG8509 / 32535 FlyBaseID:FBgn0030696 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_015173.1 Gene:RRD2 / 855951 SGDID:S000006073 Length:358 Species:Saccharomyces cerevisiae


Alignment Length:387 Identity:96/387 - (24%)
Similarity:172/387 - (44%) Gaps:60/387 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PVKQVRSLEDLDRWVRSQAYYDIIAYISNTSKAIQGHRLTQ-TFPVTE----QMRRLSEIFDGLD 86
            |.|::.:.:|:..|..|........:|.:.:::::||..:| ..|::|    .|..||:|.|   
Yeast     3 PEKRLLTPDDMKLWEESPTRAHFTKFIIDLAESVKGHENSQYKEPISESINSMMNLLSQIKD--- 64

  Fly    87 HLIVEHTPKIEDSYLALPFGQVRSKAYRTWMREMYQHVFSKLDEAI------NVNCKHINELGQY 145
              |.:..|.|:|:. :..||:|.       .|:.|..| |:....|      ::..:.:.:|..|
Yeast    65 --ITQKHPVIKDAD-SSRFGKVE-------FRDFYDEV-SRNSRKILRSEFPSLTDEQLEQLSIY 118

  Fly   146 LRRSFGNGNTLDFGPANELMFLFFLCGLFRAGIL-LAKDTVAAALMLFNRYVNVVRRLISTYGLT 209
            |..|:||...:|:|..:||.|:..|.||:..||. |:.|:....|.:|..|:.::|.|.:.|.| 
Yeast   119 LDESWGNKRRIDYGSGHELNFMCLLYGLYSYGIFNLSNDSTNLVLKVFIEYLKIMRILETKYWL- 182

  Fly   210 IAKDPACT-----IEDYYFLPYLWGAAQLSVDSPFSPMQCEQGKIMDNYRQDFMMLEIIDHLQKT 269
               :||.:     ::||:|||:|:||.||:......|:.....::::.:...::....|..:.|.
Yeast   183 ---EPAGSHGVWGLDDYHFLPFLFGAFQLTTHKHLKPISIHNNELVEMFAHRYLYFGCIAFINKV 244

  Fly   270 RSGPLSRVALQLW------SILSIPTWPQVYRGLERNYIDHVLSSFGTVEQAIFCELMSF-EAVV 327
            :|....|     |      .|..:.||.:|..|:.:.|...|||....::...|.|.:.. :.|.
Yeast   245 KSSASLR-----WHSPMLDDISGVKTWSKVAEGMIKMYKAEVLSKLPIMQHFYFSEFLPCPDGVS 304

  Fly   328 PIMPLQRAHLGTHLIVDEKENEDELEQKYGENRWSLSPPVSRYVSMEPESFLGFQASKTHNK 389
            |  |....|.||     :|::|...| .:....|.....:..     |.:....:.:|.|:|
Yeast   305 P--PRGHIHDGT-----DKDDECNFE-GHVHTTWGDCCGIKL-----PSAIAATEMNKKHHK 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8509NP_573079.1 PTPA 27..324 CDD:281137 82/320 (26%)
RRD2NP_015173.1 LAG1 1..358 CDD:227390 96/387 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345861
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5057
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1048
OMA 1 1.010 - - QHG54183
OrthoFinder 1 1.000 - - FOG0002736
OrthoInspector 1 1.000 - - otm46626
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10012
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.760

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