DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8509 and RRD1

DIOPT Version :9

Sequence 1:NP_573079.1 Gene:CG8509 / 32535 FlyBaseID:FBgn0030696 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_012113.1 Gene:RRD1 / 854653 SGDID:S000001415 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:353 Identity:90/353 - (25%)
Similarity:148/353 - (41%) Gaps:68/353 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 LSEIFDGLDHLIVEHTPKIEDSYLALP----FGQVRSKAYR--------TWMREMYQHVFSKLDE 130
            |..:.|.|.|||.|..|        ||    :|.:..:.:.        .|::||....:.::  
Yeast    70 LMGVLDKLAHLIDETPP--------LPGPRRYGNLACREWHHKLDERLPQWLQEMLPSEYHEV-- 124

  Fly   131 AINVNCKHINELGQYLRRSFGNGNTLDFGPANELMFLFFLCGLFRAGILLAKDTVAAALMLFNRY 195
                    :.||..||..|||:...||:|..:||.|:..:..|...| :......|...:|||:|
Yeast   125 --------VPELQYYLGNSFGSSTRLDYGTGHELSFMATVAALDMLG-MFPHMRGADVFLLFNKY 180

  Fly   196 VNVVRRLISTYGLTIAKDPACT-----IEDYYFLPYLWGAAQ---LSVDSPFSPMQCEQGKIMDN 252
            ..::||||.||.|    :||.:     ::|::.|.|:.|::|   |...:|..|.:.....::..
Yeast   181 YTIMRRLILTYTL----EPAGSHGVWGLDDHFHLVYILGSSQWQLLDAQAPLQPREILDKSLVRE 241

  Fly   253 YRQDFMMLEIIDHLQKTRSGPLSRVALQLWSI-LSIPTWPQVYRGLERNYIDHVLSSFGTVEQAI 316
            |:......:.|:.:.:.:.||....:..|:.| :::|.|.:|.:||.:.|...||..|..|:...
Yeast   242 YKDTNFYCQGINFINEVKMGPFEEHSPILYDIAVTVPRWSKVCKGLLKMYSVEVLKKFPVVQHFW 306

  Fly   317 FCELMSFEAVVPIMPLQRAHLGTHLIVDEKENEDELEQ----KYGENRWSLSPPVSRYVSMEPES 377
            |     .....|.:.:|.   ||.|.|.|::.|:.:||    ..|..:.|...|.|  .||.|..
Yeast   307 F-----GTGFFPWVNIQN---GTDLPVFEEKEEESIEQANAGSPGREQTSTRFPTS--TSMPPPG 361

  Fly   378 ----------FLGFQASKTHNKSKESED 395
                      .|..|.....|::..|.|
Yeast   362 VPPSGNNINYLLSHQNQSHRNQTSFSRD 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8509NP_573079.1 PTPA 27..324 CDD:281137 68/266 (26%)
RRD1NP_012113.1 LAG1 1..387 CDD:227390 88/349 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345860
Domainoid 1 1.000 198 1.000 Domainoid score I581
eggNOG 1 0.900 - - E1_COG5057
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1048
OMA 1 1.010 - - QHG54183
OrthoFinder 1 1.000 - - FOG0002736
OrthoInspector 1 1.000 - - otm46691
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10012
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.760

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