DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LE and Pglyrp1

DIOPT Version :10

Sequence 1:NP_573078.1 Gene:PGRP-LE / 32534 FlyBaseID:FBgn0030695 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_445825.1 Gene:Pglyrp1 / 84387 RGDID:621429 Length:183 Species:Rattus norvegicus


Alignment Length:169 Identity:72/169 - (42%)
Similarity:103/169 - (60%) Gaps:16/169 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IIPRSSWLAQKPMDEPLPLQLPVKYVVILHTA------TESSEKRAINVRLIRDMQCFHIESRGW 235
            ::|||.|.| .|.:....|:.||:||||.|||      .:|.|::|.||:|      :.::..||
  Rat    21 VVPRSEWKA-LPSECSKGLKKPVRYVVISHTAGSFCSSPDSCEQQARNVQL------YQMKQLGW 78

  Fly   236 NDIAYNFLVGCDGNIYEGRGWKTVGAHTLG--YNRISLGISFIGCFMKELPTADALNMCRNLLAR 298
            .|:|||||:|.||::||||||...|.|| |  :|.:|:||:|:|.:...:|...||....|||..
  Rat    79 CDVAYNFLIGEDGHVYEGRGWTIKGDHT-GPIWNPMSIGITFMGDYSHRVPAKRALRAALNLLKC 142

  Fly   299 GVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
            ||.:|.:.::|.:..|....||.|||.:|||.||:|.|:
  Rat   143 GVSEGFLRSNYEVKGHRDVQSTLSPGDQLYEIIQSWDHY 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LENP_573078.1 PGRP 175..317 CDD:128941 60/147 (41%)
Pglyrp1NP_445825.1 PGRP 21..161 CDD:128941 60/147 (41%)

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