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Protein Alignment PGRP-LE and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_001245695.1 |
Gene: | PGRP-LE / 32534 |
FlyBaseID: | FBgn0030695 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001178890.1 |
Gene: | Pglyrp3 / 499658 |
RGDID: | 1593164 |
Length: | 339 |
Species: | Rattus norvegicus |
Alignment Length: | 173 |
Identity: | 73/173 - (42%) |
Similarity: | 113/173 - (65%) |
Gaps: | 3/173 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 166 QKFKIPKELSA-IIPRSSWLAQKPMDEPLPLQLPVKYVVILHTATESSEKRAINVRLIRDMQCFH 229
|..:|||:... ||||::|.|:: .....:.||.|:|:|:|||.||..:.|..:..:||.|.||
Rat 167 QHSEIPKKACPNIIPRTAWEARE--THCSQMNLPAKFVIIIHTAGESCNESADCLIRVRDTQSFH 229
Fly 230 IESRGWNDIAYNFLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELPTADALNMCRN 294
::.:.:.||||:||||.||.:|||.||...|:||.|||.|:|||:|:|.|:::.|...:|...::
Rat 230 MDKQDFCDIAYHFLVGQDGVVYEGVGWTIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLEAAQS 294
Fly 295 LLARGVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
|:...|..|:::::|.|:.|...::..|||:.||..|:|||||
Rat 295 LIQCAVAMGYLASNYLLMGHSDVSNILSPGQALYNIIKTWPHF 337
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LE | NP_001245695.1 |
PGRP |
175..317 |
CDD:128941 |
58/142 (41%) |
Pglyrp3 | NP_001178890.1 |
PGRP |
19..152 |
CDD:128941 |
|
PGRP |
177..317 |
CDD:128941 |
58/141 (41%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166345833 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
6 | 5.710 |
|
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