DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LE and PGRP-LF

DIOPT Version :10

Sequence 1:NP_573078.1 Gene:PGRP-LE / 32534 FlyBaseID:FBgn0030695 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_648299.3 Gene:PGRP-LF / 39064 FlyBaseID:FBgn0035977 Length:369 Species:Drosophila melanogaster


Alignment Length:161 Identity:70/161 - (43%)
Similarity:97/161 - (60%) Gaps:0/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 IIPRSSWLAQKPMDEPLPLQLPVKYVVILHTATESSEKRAINVRLIRDMQCFHIESRGWNDIAYN 241
            |:.||.||.:.|..:...|:|||..::|.|||||..|:..:.:..::.:|.||::|.||.||.||
  Fly    59 ILDRSEWLGEPPSGKYPHLKLPVSNIIIHHTATEGCEQEDVCIYRMKTIQAFHMKSFGWVDIGYN 123

  Fly   242 FLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELPTADALNMCRNLLARGVEDGHIS 306
            ||||.||.||.||||...|.|..||..||:.|:|||.|:...|.|..:...:.|:..||....:.
  Fly   124 FLVGGDGQIYVGRGWHIQGQHVNGYGAISVSIAFIGTFVNMEPPARQIEAAKRLMDEGVRLHRLQ 188

  Fly   307 TDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
            .||.:..|.|.:.|||||::|:|.:|.||.|
  Fly   189 PDYHIYAHRQLSPTESPGQKLFELMQNWPRF 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LENP_573078.1 PGRP 175..317 CDD:128941 58/139 (42%)
PGRP-LFNP_648299.3 PGRP 57..199 CDD:128941 58/139 (42%)
PGRP 236..363 CDD:470657
Blue background indicates that the domain is not in the aligned region.

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