DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LE and PGRP-LC

DIOPT Version :10

Sequence 1:NP_573078.1 Gene:PGRP-LE / 32534 FlyBaseID:FBgn0030695 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_648298.1 Gene:PGRP-LC / 39063 FlyBaseID:FBgn0035976 Length:520 Species:Drosophila melanogaster


Alignment Length:423 Identity:105/423 - (24%)
Similarity:157/423 - (37%) Gaps:129/423 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 ESSVVDSLDYDYTEEEEDADQNTSEEISTMTLGTQIATKKHSIISDTIRDLMNSINSI------- 88
            :.:.:||...|...|.|      :|:.:...||.|:....:   |..:|||...:..|       
  Fly   110 DDNAIDSSSIDSDSEAE------AEDYTVQKLGHQVTYPPN---SSHLRDLNQGLTVISRHVAPG 165

  Fly    89 -------------------------------------QTLGNVNISNSTNVHIGNVTNINGNIQI 116
                                                 |.:|::.::|||:|..|:.....|.: .
  Fly   166 EAAVPPPNPLEAGIVAKQILNGNLAVATPTSPAGGATQGIGSIALTNSTDVTFGDKHFYEGPV-T 229

  Fly   117 IADGLTQNRRDRRHVSPP---RDN-----APKT-----PTHFEDDYQDE---------------- 152
            |...|..||...:....|   :||     .|.|     .:..||..|..                
  Fly   230 IQQFLIDNRDKWKPGEGPAGGQDNPAFNGGPSTNGSAPGSKHEDPAQTPPICPFLPNTVGRKAVT 294

  Fly   153 ---------------------------SEERVRSDVFIRRQKFKIPKE------------LSAII 178
                                       ::.::|.|...|:   .||..            :...:
  Fly   295 VTVVFVTLTFLLGIVLATTTNLFGKTLNQSKIRDDDDYRQ---NIPINSTIDLDNIGGGLILRFV 356

  Fly   179 PRSSWLAQKPMDEPLPLQLPVKYVVILHTATESSEKRAINVRLIRDMQCFHIESRGWNDIAYNFL 243
            .|..||||.|..|...|:|||..|:.|.|.:|:...:||.|..:|.:|.:.|||....|||||||
  Fly   357 ERQQWLAQPPQKEIPDLELPVGLVIALPTNSENCSTQAICVLRVRLLQTYDIESSQKCDIAYNFL 421

  Fly   244 VGCDGNIYEGRGWKTVGAH--TLGYNRISLGISFIGCFMKELPTADALNMCRNLLARGVEDGHIS 306
            :|.|||:|.||||..:|||  .:.|:..||..::||.|....|:|..|::.|.||.|||:.|.|:
  Fly   422 IGGDGNVYVGRGWNKMGAHMNNINYDSQSLSFAYIGSFKTIQPSAKQLSVTRLLLERGVKLGKIA 486

  Fly   307 TDYRLICHCQC--NSTESPGRRLYEEIQTWPHF 337
            ..||.....:.  :.|:.....||.....|.|:
  Fly   487 PSYRFTASSKLMPSVTDFKADALYASFANWTHW 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LENP_573078.1 PGRP 175..317 CDD:128941 61/143 (43%)
PGRP-LCNP_648298.1 PGRP 356..490 CDD:128941 59/133 (44%)

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