DRSC/TRiP Functional Genomics Resources

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Protein Alignment PGRP-LE and PGRP-LD

DIOPT Version :10

Sequence 1:NP_573078.1 Gene:PGRP-LE / 32534 FlyBaseID:FBgn0030695 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001137893.1 Gene:PGRP-LD / 3771920 FlyBaseID:FBgn0260458 Length:327 Species:Drosophila melanogaster


Alignment Length:141 Identity:33/141 - (23%)
Similarity:60/141 - (42%) Gaps:12/141 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 PVKYVVILHTATESSEKRAINVRLIRDMQCFHIESRGWNDIAYNFLVGCDGNIYEGRGWKTVGAH 262
            |:....::.|.|.|:|.......::..::..|:     .::.|||||..|..::|.:||.....:
  Fly   191 PIGVGTVIFTHTGSNECHDDCPDVLHKLERSHV-----GELPYNFLVAGDCQVFEAQGWHYRSQY 250

  Fly   263 TLGYNRI-SLGISFIGCFMKELPTADALNMCRNLLARGVEDGHISTDYRLICHCQCNSTESPGRR 326
            ....|.| ||.::|:|.|....|....|...:.|:...::...:...|:|..      ..|....
  Fly   251 PRDLNGIDSLVMAFVGNFSGRPPIDCQLMAAQALILESLKRRILQPIYQLFV------LGSYTDA 309

  Fly   327 LYEEIQTWPHF 337
            |..|::.|||:
  Fly   310 LQRELRHWPHY 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PGRP-LENP_573078.1 PGRP 175..317 CDD:128941 27/119 (23%)
PGRP-LDNP_001137893.1 PGRP 169..306 CDD:128941 27/125 (22%)

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