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Protein Alignment PGRP-LE and Pglyrp3
DIOPT Version :9
Sequence 1: | NP_001245695.1 |
Gene: | PGRP-LE / 32534 |
FlyBaseID: | FBgn0030695 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006501534.1 |
Gene: | Pglyrp3 / 242100 |
MGIID: | 2685266 |
Length: | 359 |
Species: | Mus musculus |
Alignment Length: | 176 |
Identity: | 74/176 - (42%) |
Similarity: | 114/176 - (64%) |
Gaps: | 9/176 - (5%) |
- Green bases have known domain annotations that are detailed below.
Fly 166 QKFKIPKELSA-IIPRSSWLAQK---PMDEPLPLQLPVKYVVILHTATESSEKRAINVRLIRDMQ 226
|..:|||:... |.|||:|.|:: |. :.||.|:|:|:|||.:|..:.|..:..:||.|
Mouse 187 QHSEIPKKACPNITPRSAWEARETHCPQ-----MNLPAKFVIIIHTAGKSCNESADCLVRVRDTQ 246
Fly 227 CFHIESRGWNDIAYNFLVGCDGNIYEGRGWKTVGAHTLGYNRISLGISFIGCFMKELPTADALNM 291
.|||:::.:.||||:||||.||.:|||.||...|:||.|||.|:|||:|:|.|:::.|...:|..
Mouse 247 SFHIDNQDFCDIAYHFLVGQDGEVYEGVGWNIEGSHTYGYNDIALGIAFMGNFVEKPPNEASLKA 311
Fly 292 CRNLLARGVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
.::|:...|..|:::::|.|:.|...::..|||:.||..|:|||||
Mouse 312 AQSLIQCAVAKGYLTSNYLLMGHSDVSNILSPGQALYNIIKTWPHF 357
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LE | NP_001245695.1 |
PGRP |
175..317 |
CDD:128941 |
59/145 (41%) |
Pglyrp3 | XP_006501534.1 |
PGRP |
40..172 |
CDD:128941 |
|
PGRP |
197..337 |
CDD:128941 |
59/144 (41%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842402 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S7191 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
5 | 4.650 |
|
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