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Protein Alignment PGRP-LE and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_001245695.1 |
Gene: | PGRP-LE / 32534 |
FlyBaseID: | FBgn0030695 |
Length: | 345 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_033428.1 |
Gene: | Pglyrp1 / 21946 |
MGIID: | 1345092 |
Length: | 182 |
Species: | Mus musculus |
Alignment Length: | 171 |
Identity: | 75/171 - (43%) |
Similarity: | 102/171 - (59%) |
Gaps: | 16/171 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 175 SAIIPRSSWLAQKPMDEPLPLQLPVKYVVILHTA------TESSEKRAINVRLIRDMQCFHIESR 233
|.|:|||.|.| .|.:....|..||:||||.||| .:|.|::| |::|.:|....
Mouse 18 SFIVPRSEWRA-LPSECSSRLGHPVRYVVISHTAGSFCNSPDSCEQQA------RNVQHYHKNEL 75
Fly 234 GWNDIAYNFLVGCDGNIYEGRGWKTVGAHTLG--YNRISLGISFIGCFMKELPTADALNMCRNLL 296
||.|:|||||:|.||::||||||...|.|| | :|.:|:||:|:|.||..:|...||....|||
Mouse 76 GWCDVAYNFLIGEDGHVYEGRGWNIKGDHT-GPIWNPMSIGITFMGNFMDRVPAKRALRAALNLL 139
Fly 297 ARGVEDGHISTDYRLICHCQCNSTESPGRRLYEEIQTWPHF 337
..||..|.:.::|.:..|....||.|||.:||:.||:|.|:
Mouse 140 ECGVSRGFLRSNYEVKGHRDVQSTLSPGDQLYQVIQSWEHY 180
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-LE | NP_001245695.1 |
PGRP |
175..317 |
CDD:128941 |
64/149 (43%) |
Pglyrp1 | NP_033428.1 |
PGRP |
20..160 |
CDD:128941 |
63/147 (43%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167842392 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5479 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
7 | 6.710 |
|
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