DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8974 and AT3G58030

DIOPT Version :9

Sequence 1:NP_573076.1 Gene:CG8974 / 32532 FlyBaseID:FBgn0030693 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_001190122.1 Gene:AT3G58030 / 824972 AraportID:AT3G58030 Length:436 Species:Arabidopsis thaliana


Alignment Length:188 Identity:70/188 - (37%)
Similarity:96/188 - (51%) Gaps:27/188 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 WTRDITEPLAEESS------TSQLRPLGTSIP----TNSTASELKK-----SNTSYSFTGDYLSG 86
            ||.|..|..:|..:      .::.|.|...||    |::.|.||.:     .|.:...||:....
plant    36 WTNDPPERSSEAVTRIRTRHRTRFRQLNLPIPVLSETHTMAIELNQLMGNSVNRAAMQTGEGSER 100

  Fly    87 GNKADLK----GGYPFGGTDTDTKANEKDKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWP 147
            ||: |||    |....|....|.||   |.||...:|.:.::||||||.:|:.|::.||||:|||
plant   101 GNE-DLKMCENGDGALGDGVLDKKA---DVEKSSGSDGNFFDCNICLDLSKEPVLTCCGHLYCWP 161

  Fly   148 CLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNSTHQEDPRN---KVPPRPAGQRTE 202
            ||:|||.. .:.|.|||||..|....|.|:|||.:..:|...:   |||.||..:|.|
plant   162 CLYQWLQI-SDAKECPVCKGEVTSKTVTPIYGRGNHKREIEESLDTKVPMRPHARRIE 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8974NP_573076.1 RING 124..169 CDD:238093 26/44 (59%)
AT3G58030NP_001190122.1 PLN03208 134..>226 CDD:178747 40/86 (47%)
RING-HC_AtRMA_like 137..180 CDD:319659 25/43 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5574
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000717
OrthoInspector 1 1.000 - - mtm1175
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12313
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.870

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