DRSC/TRiP Functional Genomics Resources

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Protein Alignment sordd1 and sordd2

DIOPT Version :10

Sequence 1:NP_573076.1 Gene:sordd1 / 32532 FlyBaseID:FBgn0030693 Length:277 Species:Drosophila melanogaster
Sequence 2:NP_727898.2 Gene:sordd2 / 318098 FlyBaseID:FBgn0052581 Length:283 Species:Drosophila melanogaster


Alignment Length:274 Identity:254/274 - (92%)
Similarity:260/274 - (94%) Gaps:4/274 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEEPKSVPTAELPSTSTGASSSSSTLSNNVSYDKIAWTRDITEPLAEESSTSQLRPLGTSIPTNS 65
            |||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MEEPKSVSTAELPSTSTGASSSSSTLSNNVSYDKIAWTRDITEPLAEESSTSQLRPLGTSIPTNS 65

  Fly    66 TASELKKSNTSYSFTGDYLSGGNKADLKGGYPFGGTDTDTKANEKDKEKEHTADDSLYECNICLD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    66 TASELKKSNTSYSFTGDYLSGGNKADLKGGYPFGGTDTDTKANEKDKEKEHTADDSLYECNICLD 130

  Fly   131 TAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNSTHQEDPRNKVPPR 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   131 TAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIPLYGRNSTHQEDPRNKVPPR 195

  Fly   196 PAGQRTEPDPVPGFPGFGFGDGFHMSFGIGAFPFGFITSTLNFGEPRPPAANRGTRQYEDEQ-TL 259
            |||||||||||||||||||||||||||||||||||||||.|||.||||||..|  |.:|||. .|
  Fly   196 PAGQRTEPDPVPGFPGFGFGDGFHMSFGIGAFPFGFITSRLNFFEPRPPADIR--RLHEDEPWAL 258

  Fly   260 SKLFSYLAVVWILW 273
            ||||.:. ||::::
  Fly   259 SKLFWHF-VVFVIY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sordd1NP_573076.1 RING-HC_RNF185 123..179 CDD:438402 55/55 (100%)
sordd2NP_727898.2 RING-HC_RNF185 123..179 CDD:438402 55/55 (100%)

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