DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sordd1 and LOC1276712

DIOPT Version :10

Sequence 1:NP_573076.1 Gene:sordd1 / 32532 FlyBaseID:FBgn0030693 Length:277 Species:Drosophila melanogaster
Sequence 2:XP_061498529.1 Gene:LOC1276712 / 1276712 VectorBaseID:AGAMI1_011862 Length:282 Species:Anopheles gambiae


Alignment Length:300 Identity:145/300 - (48%)
Similarity:184/300 - (61%) Gaps:58/300 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SVPTAEL---PSTSTGASSSSSTLSNNVSYDKIAWTRDITEPLAEESSTSQLRPLG--TSIPTNS 65
            :.|||.|   .:..|.:||||||.:.         |.|..:|    |::.....||  |:||.:|
Mosquito    13 NAPTAPLLEDLNEDTPSSSSSSTATT---------TTDSGKP----STSYSFSMLGADTAIPGSS 64

  Fly    66 TASELKKSNTSYSF----TGD-----YLSGGNKA------DLKGGYPFG-GTDT---DTKANEKD 111
                   |:||||.    :||     ..:||:|.      |..||...| |..|   .|:|.|::
Mosquito    65 -------SSTSYSIKRPQSGDDSIQSAAAGGSKTKTQLENDTAGGDGAGEGASTGAPSTEAGEEE 122

  Fly   112 KEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWLLTRPNRKLCPVCKAAVDKDKVIP 176
            |:     |||::|||||||||||||||||||||||||:|||:  ...|..|||||:::.|:||||
Mosquito   123 KK-----DDSMFECNICLDTAKDAVVSMCGHLFCWPCIHQWM--NGYRNTCPVCKSSISKEKVIP 180

  Fly   177 LYGRNSTHQEDPRNKVPPRPAGQRTEPDPVPGFPGFGFGDG-FHMSFGIGAFPFGFITSTLNFGE 240
            ||||..: :||||..||||||||||||:...||..| .||| ||||||||||||||.|||||||:
Mosquito   181 LYGRGGS-KEDPRKTVPPRPAGQRTEPEQPHGFQSF-TGDGSFHMSFGIGAFPFGFFTSTLNFGD 243

  Fly   241 PRPPAAN---RGTRQYEDEQTLSKLFSYLAVVWILWLFYA 277
            .| .|.|   ..||:.|::|.||::|.|:|::::.||..|
Mosquito   244 FR-GAGNVTRENTRESEEDQFLSQVFLYVALIFLAWLAMA 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sordd1NP_573076.1 RING-HC_RNF185 123..179 CDD:438402 40/55 (73%)
LOC1276712XP_061498529.1 None

Return to query results.
Submit another query.