DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhp and rhpn1

DIOPT Version :9

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_001008116.1 Gene:rhpn1 / 493478 XenbaseID:XB-GENE-970431 Length:706 Species:Xenopus tropicalis


Alignment Length:717 Identity:275/717 - (38%)
Similarity:396/717 - (55%) Gaps:93/717 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RGSDPRAATCRSKLQNRRCKLNKEINKELRLRAGAENLYKATSNRKLRDTVALELSFVNSNLQLL 97
            :|.||.|.|.|||||:||.::|::||||:|:|||||||::||:|.|:|:|||||||:||||||||
 Frog    23 KGCDPFAQTQRSKLQHRRARINQQINKEMRMRAGAENLFRATTNHKVRETVALELSYVNSNLQLL 87

  Fly    98 KEQLAELNSSVEIYQSESHNGIMPMIPLGLKETKEINFMEPFSDFILEHYSEEPSMYIDAIADMT 162
            ||:|.||||||||||:||....:||||||||||||::..:...|||:.||.::.::|...|.:..
 Frog    88 KEELEELNSSVEIYQNESDAINVPMIPLGLKETKELDLTDALKDFIVHHYGDDGTLYDKEIREFM 152

  Fly   163 DTRQASKTPSRDALGVALLFRYYNTLYYVERRFFPPDRNLGVYFEWYDSLTGVPSCQRTIAFEKA 227
            |.|||.:||||...|:.||..|||.||:::.|||||::.|||:|.|||||||||||||.:||||.
 Frog   153 DLRQAMRTPSRSDAGIELLMEYYNQLYFLDNRFFPPNKPLGVFFHWYDSLTGVPSCQRALAFEKG 217

  Fly   228 CTLFNLGGIYTQIGARHDRTTERGLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQVLDVLVSL 292
            ..|||:|.:|||||||.||.:..|:|.|:|:|.:|||.|.::.:.|:||||:|:....|.:||.|
 Frog   218 SVLFNMGALYTQIGARQDRLSVEGVDTAIDAFQKAAGCFSYLKENFSNAPSLDMSTASLSMLVRL 282

  Fly   293 MLSQARECLFEKLQLQIEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYLPECWAGLV 357
            |::|.:||:|||..||........|.  ..|.|||::...|..:::.:.......|:|..|:.:|
 Frog   283 MVAQVQECIFEKFVLQNPRSDFFTQL--QAAQEAARVEEVYTLVYRTMTQPPVKDYIPFSWSTMV 345

  Fly   358 PVKAELYKAFAHFYKARSIDATDELKASKSSQKNQESFIGNSQEVERITTADYGAS------DEA 416
            .||||.::|.:|:|.|.::  .|...||::..|.||.......     .||..|.|      |..
 Frog   346 HVKAEHFRALSHYYAACAL--CDYSTASEAEVKTQEKAFSQFH-----VTAPEGPSVGFVLQDPE 403

  Fly   417 STSIANKLAHLKEALASIEEAQRLQRMCRFLKNKASLTEVMKEVHSKSQEELEKFRLQASAKNIE 481
            ......| ||||:|:...|||.|:..:.:.|:....|.||:...|.:|   |.|:      .:|:
 Frog   404 ERRKLGK-AHLKKAIMKHEEAMRIHVLSKILRKMDILQEVLTLTHKQS---LSKY------SDID 458

  Fly   482 DGDLLERSVEASSKFTLSLTGPD-----FTSHKVKDPFKRLGPIAIFSARRHWTAPRCVRLQKGS 541
            ..:....:.||.....::...|:     |:..|..|.|.||||:::|||:..|..|:.|.|:|| 
 Frog   459 HEEDFFETGEAPDIQPITCQRPEIKTPVFSKVKATDIFHRLGPLSVFSAKHKWRPPQKVHLEKG- 522

  Fly   542 SLYHSVPSNDNKCPLDNDDDEEHDGGYNLYKEEFENFGFHVRGDAPVIIAHVEINSLADLGGIKE 606
                              ||               .|||.:||||||::|.:.....|...|:.|
 Frog   523 ------------------DD---------------GFGFTLRGDAPVLVAGIVPGGCAAEAGVME 554

  Fly   607 GDFIVEIAGVDVKWYSHQQVVQLIQSCGST-LELRVITPMDRNYLKPLSSKGSLSTLS-AASSSG 669
            ..:||.::|.|.:|..|.||||.::..|.. :::.|:  :.:|....:...|..|:.| ...:.|
 Frog   555 NSYIVSVSGADCRWAKHAQVVQQLKDAGEDGVDIEVV--VFQNPETQIMLWGPQSSFSWQRGAHG 617

  Fly   670 ISSGFPSPTSIAAKPKLHL--------------------KTSSSSRPAGSVSSSS---WNPFRRT 711
            .:...|......|.|.|.|                    |.::.....||.|:|:   |:  :|:
 Frog   618 WAGHVPQQWDYNASPSLSLSQVVDKRASMLTACELLRGNKENNKKSILGSKSASALRLWS--KRS 680

  Fly   712 PS 713
            .|
 Frog   681 KS 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023 60/83 (72%)
BRO1_Rhophilin 122..514 CDD:185767 155/402 (39%)
PDZ_signaling 570..642 CDD:238492 24/72 (33%)
rhpn1NP_001008116.1 HR1_Rhophilin-1 24..108 CDD:212023 60/83 (72%)
BRO1_Rhophilin_1 112..496 CDD:185771 155/402 (39%)
PDZ_signaling 514..591 CDD:238492 31/110 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 287 1.000 Domainoid score I1563
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 450 1.000 Inparanoid score I1577
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D286986at33208
OrthoFinder 1 1.000 - - FOG0003216
OrthoInspector 1 1.000 - - otm49461
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5869
SonicParanoid 1 1.000 - - X1868
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.090

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