DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhp and alx1

DIOPT Version :10

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_593085.1 Gene:alx1 / 2541947 PomBaseID:SPAC2G11.05C Length:701 Species:Schizosaccharomyces pombe


Alignment Length:539 Identity:103/539 - (19%)
Similarity:178/539 - (33%) Gaps:189/539 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 IAFEKACTLFNLGGIY--TQIGARHDRTTERGLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQ 284
            :.||.||.::.|...|  |.|...:::..  .|..|...|..:||.||:|.|.:....|:|....
pombe   100 LIFEHACLIYRLACTYHTTAISLCNEKPP--NLVQACQYFQLSAGCFRYINDFYIYTKSLDFNEN 162

  Fly   285 VLDVLVSLMLSQARECLFEKLQLQIEAMSHDC---------------------QAFRDLAGE--- 325
            :|.......|::|:.|:|.|      |.|:|.                     :.|::..|.   
pombe   163 LLKAWEIYCLAEAQTCIFSK------ANSNDTTSESIIVKILAKVFLLYEDAYKLFKNATGAPSI 221

  Fly   326 -------------------AAQISHEYNEMHKNIQANDTHTYLPECWAGLVPVKAELYKAFAHFY 371
                               .::.|:..|:..:||      :||.   ..|:..|..|...|...:
pombe   222 FVHWTYIQKLFYQTITYQIISRTSYSLNKYGENI------SYLR---LSLLHCKEALKTRFDFGF 277

  Fly   372 KARSIDATDELKAS-----KSSQKNQESF-------IGNSQEVERITTADYGASDEASTSIANKL 424
            ..:..:..::|::|     |.::::.:..       :|:...::.:|.......|    .:.:|.
pombe   278 NVKVYEKLEKLESSLQFELKRNERDNDFIHLQPEIPVGSFPLLDTVTMVQSITPD----VLTDKT 338

  Fly   425 AHL--------KEALASIEEAQRLQRMCRFLKNKASLTEVMKEVHSKSQEELEK-FRLQASAKNI 480
            |..        ||.:..|||.:           |..|...:|.:...::|..|| |.|....|::
pombe   339 AAYPYFSTCLDKEFMDLIEEHE-----------KNILDAAVKSIDCLTKEGTEKLFALMEEIKSV 392

  Fly   481 EDGDLLERSVEASSKFTLSLTGPDFTSHKVKDPF---KRLGPIAIFSAR---------------R 527
            .|...:..                 ||:||.:.|   |.||.:....:.               |
pombe   393 NDNRYITE-----------------TSNKVMENFTEIKNLGGLEFLRSEASSLDCLIDKVNGTYR 440

  Fly   528 HWTAPRCVRLQKGSSLYHSVPSNDNKCPLDNDDDEEHDGGYNLYKEEFENFGFHVRGDAPVIIAH 592
            |.    |..|.:   :.:||.|:.|                  .||:    ||:    :.||..|
pombe   441 HC----CQALDE---IINSVKSSQN------------------MKEK----GFY----SDVIKLH 472

  Fly   593 VEINSL---------------ADLGGIKEGDFIVEIAGVDVKWYS------HQQVVQLIQSCGST 636
            .|::.|               .|:...  |..|.|::....:..|      :....||:....|.
pombe   473 EEVSLLKVNVENSQNAKDTIQKDISAF--GKDIFELSAQSERILSNLAEKKNPNTDQLLLQANSY 535

  Fly   637 LELRVITPMDRNYLKPLSS 655
            |....:...:||.||.|.|
pombe   536 LAQWDLLKDERNMLKKLGS 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023
BRO1_Rhophilin 122..514 CDD:185767 67/357 (19%)
PDZ_canonical 578..642 CDD:483948 16/84 (19%)
alx1NP_593085.1 BRO1_ScRim20-like 2..354 CDD:185764 50/274 (18%)
PRK01156 483..>675 CDD:100796 15/74 (20%)
Blue background indicates that the domain is not in the aligned region.

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