DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhp and BROX

DIOPT Version :9

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_006711236.1 Gene:BROX / 148362 HGNCID:26512 Length:428 Species:Homo sapiens


Alignment Length:418 Identity:82/418 - (19%)
Similarity:157/418 - (37%) Gaps:103/418 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 MEPFSDFILEHYSEEPSMYIDA-----------IADMTDTRQASKTPSRDALGVALLFRYYNTLY 189
            :|.|:|.     |..|.|..:|           |..:.::.|.||                  |.
Human    61 LELFTDL-----SCNPEMMKNAADSYFSLLQGFINSLDESTQESK------------------LR 102

  Fly   190 YVERRFFPPDRNLGVYFEWYDSLTG-VPSCQRTIAFEKACTLFNLGGIYTQIGAR---HDRTTER 250
            |::.            |:|.|:|.| |||.|:...||.....||:...||:..:|   .:..||.
Human   103 YIQN------------FKWTDTLQGQVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITED 155

  Fly   251 GLDLAVDSFLRAAGVFRHIYDTFTNAPSM--------DLKPQVLDVLVSLMLSQARECLFEK-LQ 306
            .......|...|||:|:|:.:  ::.|.:        ||:.::::..|....::|:|....: ::
Human   156 EAKEVHRSLKIAAGIFKHLKE--SHLPKLITPAEKGRDLESRLIEAYVIQCQAEAQEVTIARAIE 218

  Fly   307 LQ-----IEAMSHDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYLPECWAGLVPVKAELYKA 366
            |:     |.|::::...|...|      .|..:.:.....|.         |...:.:|...|.|
Human   219 LKHAPGLIAALAYETANFYQKA------DHTLSSLEPAYSAK---------WRKYLHLKMCFYTA 268

  Fly   367 FAHFYKARSIDATDELKASKSSQKNQESFIGNSQEVERITTADYGASDEASTSIA-------NKL 424
            :|:.|...::.|:|:...:..|.:..|.....::.:    ..:||.:.....::.       .||
Human   269 YAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEAL----CKEYGETKGPGPTVKPSGHLFFRKL 329

  Fly   425 AHLKEALASIEEAQRLQRMCRFLKNKASLTEVMKEVHSKSQE----ELEKFRLQASAKNIEDGDL 485
            .:|.:  .::|:.||......|.|......::..:.:....|    |.....:|.:.:.:...||
Human   330 GNLVK--NTLEKCQRENGFIYFQKIPTEAPQLELKANYGLVEPIPFEFPPTSVQWTPETLAAFDL 392

  Fly   486 LERSVEASSKFTLSLTGPDFTSHKVKDP 513
            .:|..:.|:|     ..|:.....||:|
Human   393 TKRPKDDSTK-----PKPEEEVKPVKEP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023
BRO1_Rhophilin 122..514 CDD:185767 82/418 (20%)
PDZ_signaling 570..642 CDD:238492
BROXXP_006711236.1 BRO1_Brox_like 21..373 CDD:185766 71/369 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.