DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhp and Ptpn23

DIOPT Version :9

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:NP_476552.2 Gene:Ptpn23 / 117552 RGDID:619892 Length:1666 Species:Rattus norvegicus


Alignment Length:774 Identity:170/774 - (21%)
Similarity:278/774 - (35%) Gaps:233/774 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 MPMIPLGLKETKEINFMEPFSDFILEHYSEEPSMYIDAIADMTDTRQASKTPSRDALGVALLFRY 184
            ||||.|.|||..:.:|......|:|::|.|.|..|.:.:..:...||.:...:||..|.::|.:|
  Rat     7 MPMIWLDLKEAGDFHFQSAVKKFVLKNYGENPEAYNEELKKLELLRQNAIRVARDFEGCSVLRKY 71

  Fly   185 YNTLYYVERRF-FPPDRNLGVYFEWYDSLTGVPSCQRTIAFEKACTLFNLGGIYTQIGARHDRTT 248
            ...|:|::.|. ....:...|...|.:..:|.......|.:|:||.|:|||.:::.:||...|.:
  Rat    72 LGQLHYLQSRVPMGSGQEAAVAITWTEIFSGKSVAHEDIKYEQACILYNLGALHSMLGAMDKRVS 136

  Fly   249 ERGLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQVLDVLVSLMLSQARECLFEKLQLQIEAMS 313
            |.|:.::...|..|||.|.::.:.|..|.|:|:..|:|.:.|:|||.||:|||.||      :|.
  Rat   137 EEGMKVSCTHFQCAAGAFAYLREHFPQAFSVDMSRQILTLNVNLMLGQAQECLLEK------SML 195

  Fly   314 HDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYL---PECWAGLVPVKAELYKAFAHFYKARS 375
            .:.::|. :|..:||:...|.|..:.::..||.:.|   .:.|..||.:|...:.|.||.:..:.
  Rat   196 DNRKSFL-VARISAQVVDYYKEACRALENPDTASLLGRIQKDWKKLVQMKIYYFAAVAHLHMGKQ 259

  Fly   376 ID---------------------------------------ATDELKASKSSQKNQESFIGNSQE 401
            .:                                       |.|.:....:|.|....||.: :.
  Rat   260 AEEQQKFGERVAYFQSALDKLNEAIKLAKGQPDTVQDALRFAMDVIGGKYNSAKKDNDFIYH-EA 323

  Fly   402 VERITTAD--YGA----------SDEAST--SIANKL----AHLKEALASIEEAQRLQRMCRFLK 448
            |..:.|..  .||          :|.|.|  .|..||    ||...:|.|.|:|:.|:.|...::
  Rat   324 VPALDTLQPVKGAPLVKPLPVNPTDPAVTGPDIFAKLVPMAAHEASSLYSEEKAKLLREMLAKIE 388

  Fly   449 NKASLTEVMKEVHSKSQ------EELEKFR----------------------------------- 472
            :|   .||:.:.....|      :.|:.:.                                   
  Rat   389 DK---NEVLDQFMDSMQLDPDTVDNLDAYNHIPPQLMEKCAALSVRPDTVKNLVQSMQVLSGVFT 450

  Fly   473 -LQASAKNIEDGDLLERSVEASSKFTLSL------TGPDFTSHKVKDPFKRLGPIAIFSARRHWT 530
             ::||.|:|.  ||||.......|...:|      .||..|.       ..||.:     ||.|.
  Rat   451 DVEASLKDIR--DLLEEDELQEQKLQETLGQAGAGPGPSVTK-------AELGEV-----RREWA 501

  Fly   531 ---------------APRCVRLQKGSSLYHSVP-------------SNDNKCPLDN--------- 558
                           ..|.:.|..|:....|.|             :.::|..|.|         
  Rat   502 KYTEVHEKASFTNSELHRAMNLHVGNLRLLSGPLDQVRAALPTPALTPEDKAVLQNLKRILAKVQ 566

  Fly   559 -------------------DD------DEEHDGGYNLYKEEFENFGFHVRGDAPVIIAHVEINSL 598
                               ||      ..:|.....|::|:.:.:        ..:..::|.|..
  Rat   567 EMRDQRVSLEQQLRELIQKDDITASLVTTDHSEMKKLFEEQLKKY--------DQLKVYLEQNLA 623

  Fly   599 AD---LGGIKEGDFIVEIAGV-------DVKWYSHQQVVQLIQSCGSTLELRVITPMDRNYLKPL 653
            |.   |..:.|.:  |:.|.|       |.||.|..|.  |:.|..:..:|...:...:::...|
  Rat   624 AQDNVLRALTEAN--VQYAAVRRVLSELDQKWNSTLQT--LVASYEAYEDLMKKSQEGKDFYADL 684

  Fly   654 SSKGSLSTLSAASS--------------SGISSGFPSPTSIAAKPKLHLKTSSSSRPAG 698
            .||.: :.|..|.|              ..:....|.|...|.||.|..:....:..||
  Rat   685 ESKVA-ALLERAQSLCRAQEAARQQLLDRELKKKAPPPRPTAPKPLLSRREEGEAAEAG 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023
BRO1_Rhophilin 122..514 CDD:185767 120/500 (24%)
PDZ_signaling 570..642 CDD:238492 18/81 (22%)
Ptpn23NP_476552.2 BRO1_HD-PTP_like 2..357 CDD:185762 93/357 (26%)
V_HD-PTP_like 362..702 CDD:185747 66/369 (18%)
ALIX_LYPXL_bnd 417..703 CDD:290660 53/312 (17%)
Y_phosphatase 1250..1480 CDD:278528
PTPc 1250..1479 CDD:238006
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2220
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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