DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhp and ptpn23a

DIOPT Version :10

Sequence 1:NP_511168.3 Gene:Rhp / 32531 FlyBaseID:FBgn0026374 Length:718 Species:Drosophila melanogaster
Sequence 2:XP_005158252.1 Gene:ptpn23a / 100007322 ZFINID:ZDB-GENE-100921-24 Length:2003 Species:Danio rerio


Alignment Length:470 Identity:117/470 - (24%)
Similarity:204/470 - (43%) Gaps:116/470 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 MPMIPLGLKETKEINFMEPFSDFILEHYSEEPSMYIDAIADMTDTRQASKTPSRDALGVALLFRY 184
            ||||.|.|||..|..|......|||::|.|:|..|.:.:..:...||::...:||..|.:.|.:|
Zfish     7 MPMIWLDLKEAGEFQFSPTVKQFILKNYGEDPDNYNEQLKKLEQLRQSAVNVTRDFEGCSTLRKY 71

  Fly   185 YNTLYYVERRFFPP---DRNLGVYFEWYDSLTGVPSCQRTIAFEKACTLFNLGGIYTQIGARHDR 246
            :..|:|::.|.  |   .:...|...|.:..:|.......|.:|:||.|:|||.:::.:||..:|
Zfish    72 FGQLHYLQSRV--PLGLGQEAAVPISWTEIFSGKTVTHEDICYEQACILYNLGALHSMLGAMDNR 134

  Fly   247 TTERGLDLAVDSFLRAAGVFRHIYDTFTNAPSMDLKPQVLDVLVSLMLSQARECLFEKLQLQIEA 311
            .:|.|:.::...|..:||.|.::.|.|:::.|:|:..|:|::.::|||.||:|||.||      :
Zfish   135 VSEEGMKVSCTHFQCSAGAFAYLRDHFSHSYSVDMSHQILNLNINLMLGQAQECLLEK------S 193

  Fly   312 MSHDCQAFRDLAGEAAQISHEYNEMHKNIQANDTHTYLPEC---WAGLVPVKAELYKAFAHFYKA 373
            |..:.::|. :|..:||:...|.|..:.::.::|.:.|.:.   |..||.:|...:.|.||    
Zfish   194 MLDNRKSFL-VARISAQVVDYYKEACRALENSETASMLGKIQKDWKKLVQMKIYYFAAIAH---- 253

  Fly   374 RSIDATDELKASKSSQKNQESFIGNSQEVERITTADYGASDEASTSIANKLAHLKEALASIEEAQ 438
                    |...|.:::.|:                ||          .::|:|:.:|..:.||.
Zfish   254 --------LHMGKQAEEQQK----------------YG----------ERVAYLQSSLDKLGEAI 284

  Fly   439 RLQRMCRFLKNKASLTEVMKEVHSKSQEELEKFRLQASAKNIEDGDLLERSVEASSKFTLSLTGP 503
            :|                     :|.|.:                     ||:.:.:||:.:.|.
Zfish   285 KL---------------------AKGQPD---------------------SVQEALRFTMDVIGG 307

  Fly   504 DFTSHKVKDPFKRLGPIAIFSARRHWTAPRCVRLQ--KGSSLYHSVPSNDNKCPLDNDD------ 560
            .|.|.|..:.|       |:    |.:.|....|.  ||:.|..::|.|.....:...|      
Zfish   308 KFNSAKKDNDF-------IY----HESVPSLETLTSVKGAPLVKALPVNPTDPSVTGPDIFAKLV 361

  Fly   561 -DEEHDGGYNLYKEE 574
             ...|:.. :||.||
Zfish   362 PMAAHEAS-SLYSEE 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhpNP_511168.3 HR1_Rhophilin-1 34..118 CDD:212023
BRO1_Rhophilin 122..514 CDD:185767 99/397 (25%)
PDZ_canonical 578..642 CDD:483948
ptpn23aXP_005158252.1 BRO1_HD-PTP_like 2..357 CDD:185762 112/449 (25%)
V_HD-PTP_like 362..698 CDD:185747 5/15 (33%)
PHA03247 <704..1119 CDD:223021
Atrophin-1 968..>1361 CDD:460830
PRK12323 <1303..>1424 CDD:481241
PTP-N23 1572..1776 CDD:350387
Blue background indicates that the domain is not in the aligned region.

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