DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpS30 and Mrps30

DIOPT Version :9

Sequence 1:NP_001285297.1 Gene:mRpS30 / 32530 FlyBaseID:FBgn0030692 Length:557 Species:Drosophila melanogaster
Sequence 2:NP_067531.1 Gene:Mrps30 / 59054 MGIID:1926237 Length:442 Species:Mus musculus


Alignment Length:489 Identity:125/489 - (25%)
Similarity:189/489 - (38%) Gaps:126/489 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GQSQLQLNSTDAEPAYPEIQDLSF-------------------KARKQKDAANWHEEIRQVPTVE 65
            |:...|..:..|....||::||..                   ||.:|:....|...:...|:|:
Mouse    13 GRGLSQNAAAKASATAPEVRDLEVVATPVARYPPIVASMTADSKAARQRRVQRWQATVHAAPSVD 77

  Fly    66 EK---MIKINMPRYYGFKVVDFNDSKIPYNALPLTQHYTRTV-LEDLPSETDKKAQAKDSEQEQE 126
            ||   :.|:...:|    ||....|.:  ||....|.:|:|| :..||     .|.|    ....
Mouse    78 EKIRILTKMQFKKY----VVHPQISAL--NADRWYQSFTKTVFVSGLP-----PAPA----LSPP 127

  Fly   127 QPSVDGLFKAARGDVIDALEFAHDYYKHLEKQHNSAESNP---VERERILTQIIVEQLNRALLQS 188
            .||:|  ..|.|..|.|.:         |::|.......|   .:|.:.|...|::|:.|.|:..
Mouse   128 PPSLD--LAALRAAVCDCI---------LQEQVYVRRRRPRSLFDRRQALASSILDQVVRTLVNL 181

  Fly   189 LSEEYKHLDELDVDYNPRHEAFWAVGGVDPPKNVQKSKKGREWQKDMANESVDRMVQYTGAPYLA 253
            |:.....|....:|.....:.:|..|....|..   .:||.          :|           |
Mouse   182 LAPLNPVLSTAALDCKRSVDFYWLRGEERIPAG---HRKGH----------ID-----------A 222

  Fly   254 LRHRKQLTPWKTEAESENLELSKQLPRFKHDPRTLGYSTKHQHATNVP---------GYWPKGNE 309
            ||::....|      ...:.:|||||.|.    .|.||.    .|.:|         ..:.:..|
Mouse   223 LRYQINDKP------HNQIRISKQLPEFV----PLDYSI----PTEIPVMKCKPDKLPLFRRQYE 273

  Fly   310 NN------------FGLLSFQSRAHL---QIRPKSFGEQDQLEALHSL----AIKSSYAWLLAQA 355
            |:            :|...|    ||   :::.:....|:|.|.:.::    ||.|.:||..|||
Mouse   274 NSIFTGSKTADPCCYGHTQF----HLIPDRLKRERLIRQNQAEQVEAVFRANAIASLFAWTGAQA 334

  Fly   356 NYNGFNTYNELTYPMNTQTVITNGREWSFYEYQLNTLLLHGTNVAENPRVNFCRGTKPLPLYAEI 420
            .|.||.:..::|.|..:|.|||:|:.:||:.||||||.|.......|||.|.|.|::..||| |.
Mouse   335 MYQGFWSEADVTRPFVSQAVITDGKYFSFFCYQLNTLALTVQADQNNPRKNLCWGSQSQPLY-ET 398

  Fly   421 SASGKCVDFNDNALRHLLNFYANAPSIQRSIGEQ 454
            ........|:|..|..:::|..|.|   |..|.|
Mouse   399 VEDNDVKGFDDGTLLQIVHFLLNKP---REDGAQ 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpS30NP_001285297.1 PDCD9 6..442 CDD:284543 120/475 (25%)
Mrps30NP_067531.1 PDCD9 1..420 CDD:284543 120/475 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830620
Domainoid 1 1.000 84 1.000 Domainoid score I8295
eggNOG 1 0.900 - - E1_KOG4461
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9607
Inparanoid 1 1.050 84 1.000 Inparanoid score I5170
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006311
OrthoInspector 1 1.000 - - oto94327
orthoMCL 1 0.900 - - OOG6_108555
Panther 1 1.100 - - LDO PTHR13014
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3573
SonicParanoid 1 1.000 - - X5259
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.780

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