DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and atrnl1a

DIOPT Version :10

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_073776876.1 Gene:atrnl1a / 792417 ZFINID:ZDB-GENE-081028-60 Length:1400 Species:Danio rerio


Alignment Length:106 Identity:28/106 - (26%)
Similarity:46/106 - (43%) Gaps:25/106 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KLPNA--YIVLPSLLPRGQQPNKLREK---NAKINEVVNGLTKGL--------YRVQT-----VA 169
            |:|:|  |..||::.|.||...:...|   :.|:..|:.|.|...        |.:::     |.
Zfish   263 KVPSAESYWFLPNVKPDGQSLGRASHKAVVHGKLMWVIGGFTFNYSSFQMVMNYNLESSTWDVVP 327

  Fly   170 IDKGLVQTDG-SISHHD----MFDYKNLTNAGAKKILEPLY 205
            |:.|.:|..| |::.|.    ||..|  ..||...:.:.|:
Zfish   328 INGGPLQRYGHSLALHKDVIYMFGGK--LEAGFGNVTDELW 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 28/106 (26%)
atrnl1aXP_073776876.1 None

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