DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and megf8

DIOPT Version :10

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:XP_005158088.1 Gene:megf8 / 791154 ZFINID:ZDB-GENE-090730-1 Length:2870 Species:Danio rerio


Alignment Length:194 Identity:42/194 - (21%)
Similarity:64/194 - (32%) Gaps:61/194 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SDCRE-KDPDVIFLGDCIFETVQDTE-AWNKYFAPLHCLNFSIRDDCTEHVLW-----RIENGAL 85
            |||.. .|.|.:     ::||:.||: :.||....|..:..|:... .:..||     .:..|.|
Zfish  1487 SDCSSISDTDSL-----VWETLLDTQLSVNKAHRFLRRMGHSLMSS-PQGTLWMYGGLSLSEGIL 1545

  Fly    86 DNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVLPSLLPRGQQPNKL------ 144
            .||....|.....|..:.:|.||             ..:|         |||....:.|      
Zfish  1546 GNVYRYSVADRRWTEVLTSSVEE-------------SSMP---------LPRYHHASALVYYQFP 1588

  Fly   145 ----REKNAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFDYKNLTNAGAKKILEPL 204
                ......:..||.|:||     :.||.|...:..|.    .:...||:       .:|.|:
Zfish  1589 ISGSHSATRNLMFVVGGVTK-----EGVANDTWCLNLDS----QEWKQYKS-------SVLPPV 1636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 42/194 (22%)
megf8XP_005158088.1 CUB 36..134 CDD:238001
NanM 223..517 CDD:442289
KELCH repeat 277..326 CDD:276965
KELCH repeat 329..372 CDD:276965
KELCH repeat 380..429 CDD:276965
KELCH repeat 439..487 CDD:276965
PSI 931..982 CDD:396154
EGF_3 1088..1122 CDD:463759
Laminin_EGF 1169..1214 CDD:395007
EGF_Lam 1216..1265 CDD:238012
CUB <1307..1413 CDD:412131
NanM 1528..1814 CDD:442289 29/147 (20%)
KELCH repeat 1575..1633 CDD:276965 13/73 (18%)
KELCH repeat 1636..1676 CDD:276965 0/1 (0%)
KELCH repeat 1689..1737 CDD:276965
KELCH repeat 1745..1791 CDD:276965
Blue background indicates that the domain is not in the aligned region.

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