DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and pafah1b2

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001076320.1 Gene:pafah1b2 / 567170 ZFINID:ZDB-GENE-060526-43 Length:228 Species:Danio rerio


Alignment Length:224 Identity:94/224 - (41%)
Similarity:143/224 - (63%) Gaps:7/224 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLNF 66
            ||...|.|:.|:.||.||.|.|.||:.:|::.:|||:|:||.:.:.:|..|.|.:.|:|||.|||
Zfish     6 NPAAEPAPVTDVQGDGRWMSQHNRFVQECKDAEPDVLFVGDSMVQLMQQYEVWRELFSPLHALNF 70

  Fly    67 SIRDDCTEHVLWRIENGALDNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVL 131
            .|..|.|.:|:||::||.|:|:.|::||:.|||||..::|::||.|:||....:..:||.:.:::
Zfish    71 GIGGDTTSNVMWRLQNGELENIRPRVVVVWVGTNNHEHTADQVAGGILAIAQLLLSRLPKSKMIV 135

  Fly   132 PSLLPRGQQPNKLREKNAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFDYKNLTNAG 196
            ..|||||:.||.||||||.:|.::......|..:|.:.:....|.:||:||..|||||.:||.:.
Zfish   136 LGLLPRGEFPNPLREKNASVNNLLRASLPRLGPIQFLDMGSSFVHSDGTISSRDMFDYLHLTASA 200

  Fly   197 AKKILEPLYDLLSQILNENEPENDLTPSE 225
            .:.|...|::||.|:|.|       ||.|
Zfish   201 YRTISTTLHELLLQLLEE-------TPQE 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 88/208 (42%)
pafah1b2NP_001076320.1 PAF_acetylesterase_like 7..202 CDD:238858 83/194 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589989
Domainoid 1 1.000 140 1.000 Domainoid score I4706
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1932
Inparanoid 1 1.050 223 1.000 Inparanoid score I3504
OMA 1 1.010 - - QHG48396
OrthoDB 1 1.010 - - D1604899at2759
OrthoFinder 1 1.000 - - FOG0004246
OrthoInspector 1 1.000 - - otm24869
orthoMCL 1 0.900 - - OOG6_104898
Panther 1 1.100 - - LDO PTHR11852
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4710
SonicParanoid 1 1.000 - - X2985
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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