DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and dsd

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001263013.1 Gene:dsd / 43315 FlyBaseID:FBgn0039528 Length:1323 Species:Drosophila melanogaster


Alignment Length:112 Identity:28/112 - (25%)
Similarity:39/112 - (34%) Gaps:47/112 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLN 65
            ||.|  |:     |.|:...|.|.:    ||:        ||||.:.:...||.|....|.:|..
  Fly   214 MNSC--PS-----DSDEVECSGHGK----CRD--------GDCICDPMYRGEACNIAACPNNCFE 259

  Fly    66 FSIR------------------DDCTE---HVLWRIENGALDNVNPK 91
            ...:                  |||::   |       ||...|:||
  Fly   260 SKNQGHCRLDQERCSCYEGFAGDDCSQISAH-------GAWSTVHPK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 26/110 (24%)
dsdNP_001263013.1 CUB 86..212 CDD:238001
PLN02153 290..582 CDD:177814 6/17 (35%)
KELCH repeat 308..349 CDD:276965
Kelch_5 355..391 CDD:290565
KELCH repeat 358..420 CDD:276965
KELCH repeat 424..474 CDD:276965
KELCH repeat 482..531 CDD:276965
KELCH repeat 535..588 CDD:276965
PSI 821..870 CDD:279745
EGF_Lam 948..994 CDD:238012
EGF_Lam 995..1040 CDD:238012
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1388
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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