DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and pafah1b3

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_957352.1 Gene:pafah1b3 / 394033 ZFINID:ZDB-GENE-040426-1026 Length:221 Species:Danio rerio


Alignment Length:216 Identity:100/216 - (46%)
Similarity:145/216 - (67%) Gaps:0/216 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NPCVLPTPLPDLDGDKRWHSIHRRFISDCREKDPDVIFLGDCIFETVQDTEAWNKYFAPLHCLNF 66
            ||...|||..|:.||.||.|:|.||:||.:.|:|||:|:||.:.:.:.:.|.|.|.|:|||.|||
Zfish     6 NPAATPTPCQDIQGDGRWMSLHNRFVSDSKGKEPDVLFVGDSLIQLLHEFEVWRKLFSPLHALNF 70

  Fly    67 SIRDDCTEHVLWRIENGALDNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVL 131
            .|..|.|:|||||:.||.||.::||:|||.|||||...:.|::..|::|.:..|.|||||::.::
Zfish    71 GIGGDATQHVLWRLINGELDYISPKVVVLWVGTNNHGQTPEQICGGIMAIINVIHQKLPNSHTLV 135

  Fly   132 PSLLPRGQQPNKLREKNAKINEVVNGLTKGLYRVQTVAIDKGLVQTDGSISHHDMFDYKNLTNAG 196
            ..|||||:.||.|||:||.:|.:|......|..|..:.:|.|.|.:||||:|.||:||.:||...
Zfish   136 LGLLPRGKSPNPLRERNASVNALVQAEVASLSHVSFLNMDPGFVHSDGSIAHQDMYDYLHLTPHA 200

  Fly   197 AKKILEPLYDLLSQILNENEP 217
            .:::.|||::.|..:|.::.|
Zfish   201 YQRVCEPLHEHLKSLLEKHAP 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 97/208 (47%)
pafah1b3NP_957352.1 PAF_acetylesterase_like 7..216 CDD:238858 97/208 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589988
Domainoid 1 1.000 140 1.000 Domainoid score I4706
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 223 1.000 Inparanoid score I3504
OMA 1 1.010 - - QHG48396
OrthoDB 1 1.010 - - D1604899at2759
OrthoFinder 1 1.000 - - FOG0004246
OrthoInspector 1 1.000 - - otm24869
orthoMCL 1 0.900 - - OOG6_104898
Panther 1 1.100 - - O PTHR11852
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4710
SonicParanoid 1 1.000 - - X2985
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1312.940

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