DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and ice1

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_001030137.2 Gene:ice1 / 327355 ZFINID:ZDB-GENE-030131-5566 Length:1491 Species:Danio rerio


Alignment Length:86 Identity:24/86 - (27%)
Similarity:37/86 - (43%) Gaps:18/86 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 LDNVNPKIVVLHVGTNNVRNSAEEVAEGVLANVTKIRQKLPNAYIVLPS-----LLPRGQQPNKL 144
            |||..|    .|.|       |:..||.|..|.|.|..|....:..|||     :..:|  |:|.
Zfish  1085 LDNYLP----AHAG-------ADSPAEQVTGNQTVIETKSTQLHQGLPSNQKEQMTEKG--PDKP 1136

  Fly   145 REKNAKINEVVNGLTKGLYRV 165
            .::|.:|::.::.|....:.|
Zfish  1137 NDENRQISDALDKLGMACFDV 1157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 24/86 (28%)
ice1NP_001030137.2 SMC_N <28..815 CDD:308206
Smc 52..>301 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589991
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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