DRSC/TRiP Functional Genomics Resources

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Protein Alignment Paf-AHalpha and Atrnl1

DIOPT Version :9

Sequence 1:NP_525089.2 Gene:Paf-AHalpha / 32529 FlyBaseID:FBgn0025809 Length:225 Species:Drosophila melanogaster
Sequence 2:NP_852080.3 Gene:Atrnl1 / 226255 MGIID:2147749 Length:1378 Species:Mus musculus


Alignment Length:112 Identity:21/112 - (18%)
Similarity:41/112 - (36%) Gaps:21/112 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 AYIVLPSLLPRGQQPNKLREK---NAKINEVVNGLTKGLYRVQTV-------------AIDKGLV 175
            :|.:||::.|......:...|   :.|...|:.|.|......|.|             |:.:|.:
Mouse   288 SYWILPNVKPFSPSVGRASHKAVLHGKFMWVIGGYTFNYSSFQMVLNYNLESSIWNVGAVSRGPL 352

  Fly   176 QTDG---SISHHDMFDYKNLTNAGAKKILEPL--YDLLSQILNENEP 217
            |..|   ::...::|.|..........:.:.|  :::.||..:...|
Mouse   353 QRYGHSLALYQENIFMYGGRMETSDGNVTDELWVFNVRSQSWSTKTP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Paf-AHalphaNP_525089.2 PAF_acetylesterase_like 3..212 CDD:238858 20/105 (19%)
Atrnl1NP_852080.3 CUB 92..207 CDD:238001
DSL <234..279 CDD:302925
KELCH repeat 304..352 CDD:276965 9/47 (19%)
Kelch 1 315..364 9/48 (19%)
Kelch_5 351..391 CDD:290565 5/39 (13%)
KELCH repeat 354..407 CDD:276965 7/46 (15%)
Kelch 2 366..414 6/34 (18%)
Kelch 3 426..474
Kelch_4 467..513 CDD:290154
Kelch 4 479..530
KELCH repeat 520..573 CDD:276965
Kelch 5 532..590
Kelch_5 580..613 CDD:290565
Kelch 6 591..637
CLECT_attractin_like 747..873 CDD:153067
PSI 888..937 CDD:279745
EGF_Lam 1012..1057 CDD:238012
Interaction with MC4R. /evidence=ECO:0000269|PubMed:14531729 1287..1324
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1351..1378
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1388
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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